Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RDH11Q8TC12 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.5■□□□□ 0.55
RDH11Q8TC12 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RDH11Q8TC12 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RDH11Q8TC12 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RDH11Q8TC12 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.5■□□□□ 0.55
RDH11Q8TC12 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RDH11Q8TC12 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RDH11Q8TC12 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RDH11Q8TC12 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RDH11Q8TC12 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 KRT8P3-201ENST00000519669 1449 ntBASIC18.49■□□□□ 0.55
RDH11Q8TC12 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 CD99P1-205ENST00000527459 561 ntBASIC18.49■□□□□ 0.55
RDH11Q8TC12 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.49■□□□□ 0.55
RDH11Q8TC12 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RDH11Q8TC12 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 PCDHB18P-201ENST00000524813 2368 ntBASIC18.48■□□□□ 0.55
RDH11Q8TC12 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 KRT8P11-201ENST00000409686 1436 ntBASIC18.48■□□□□ 0.55
RDH11Q8TC12 KRT8P45-201ENST00000414328 1447 ntBASIC18.48■□□□□ 0.55
RDH11Q8TC12 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RDH11Q8TC12 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RDH11Q8TC12 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RDH11Q8TC12 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.47■□□□□ 0.55
RDH11Q8TC12 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RDH11Q8TC12 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RDH11Q8TC12 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.47■□□□□ 0.55
RDH11Q8TC12 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RDH11Q8TC12 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RDH11Q8TC12 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.47■□□□□ 0.55
RDH11Q8TC12 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RDH11Q8TC12 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RDH11Q8TC12 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RDH11Q8TC12 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.47■□□□□ 0.55
RDH11Q8TC12 AC008403.3-201ENST00000598924 454 ntBASIC18.47■□□□□ 0.55
RDH11Q8TC12 MTDHP1-201ENST00000605323 784 ntBASIC18.47■□□□□ 0.55
RDH11Q8TC12 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.47■□□□□ 0.55
RDH11Q8TC12 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RDH11Q8TC12 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RDH11Q8TC12 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RDH11Q8TC12 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms