Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IL1Q8TBN0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 TSPY21P-201ENST00000433481 731 ntBASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 AL121906.2-201ENST00000621597 723 ntBASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3IL1Q8TBN0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 AC005181.1-201ENST00000604782 1256 ntBASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3IL1Q8TBN0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 RPS2P52-201ENST00000469610 820 ntBASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
RAB3IL1Q8TBN0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 AC133552.2-202ENST00000575694 574 ntBASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms