Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SMARCC2Q8TAQ2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 AC005082.1-201ENST00000413042 2259 ntBASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 KRT8P3-201ENST00000519669 1449 ntBASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 MFAP1P1-201ENST00000442257 1255 ntBASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 AC097493.4-201ENST00000641197 219 ntBASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 MTMR9LP-203ENST00000426597 1545 ntBASIC22.01■■□□□ 1.11
SMARCC2Q8TAQ2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 C2orf69P3-201ENST00000565542 1120 ntBASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 AC012306.2-201ENST00000609350 630 ntBASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 AC090164.3-201ENST00000610780 2143 ntBASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
SMARCC2Q8TAQ2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 KRT8P32-201ENST00000512863 1461 ntBASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 AC010947.1-201ENST00000623454 693 ntBASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 AC096733.2-201ENST00000609937 1394 ntBASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 LINC01568-207ENST00000641790 1380 ntBASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCC2Q8TAQ2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC2Q8TAQ2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 CKBP1-201ENST00000565489 1086 ntBASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 AC145285.6-201ENST00000604632 637 ntBASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.97■■□□□ 1.11
SMARCC2Q8TAQ2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms