Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
NUP43Q8NFH3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP43Q8NFH3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP43Q8NFH3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP43Q8NFH3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NUP43Q8NFH3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NUP43Q8NFH3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.59■□□□□ 0.41
NUP43Q8NFH3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.59■□□□□ 0.41
NUP43Q8NFH3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NUP43Q8NFH3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NUP43Q8NFH3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NUP43Q8NFH3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.58■□□□□ 0.41
NUP43Q8NFH3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 AC096733.2-201ENST00000609937 1394 ntBASIC17.58■□□□□ 0.4
NUP43Q8NFH3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 MIR718-201ENST00000390190 70 ntBASIC17.58■□□□□ 0.4
NUP43Q8NFH3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 AC097488.1-201ENST00000507834 756 ntBASIC17.58■□□□□ 0.4
NUP43Q8NFH3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.58■□□□□ 0.4
NUP43Q8NFH3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUP43Q8NFH3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 MTMR9LP-203ENST00000426597 1545 ntBASIC17.57■□□□□ 0.4
NUP43Q8NFH3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 MFAP1P1-201ENST00000442257 1255 ntBASIC17.57■□□□□ 0.4
NUP43Q8NFH3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUP43Q8NFH3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP43Q8NFH3 RCC2P3-201ENST00000418112 1537 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms