Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.71■□□□□ 0.42
SIMC1Q8NDZ2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SIMC1Q8NDZ2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 AC097488.1-201ENST00000507834 756 ntBASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 AP000525.1-201ENST00000608286 694 ntBASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIMC1Q8NDZ2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 MIR4785-201ENST00000585005 73 ntBASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 AC007613.1-201ENST00000572811 2597 ntBASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.69■□□□□ 0.42
SIMC1Q8NDZ2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 MFAP1P1-201ENST00000442257 1255 ntBASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 PRSS44-201ENST00000515154 1146 ntBASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIMC1Q8NDZ2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 AC096733.2-201ENST00000609937 1394 ntBASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 CRYGFP-201ENST00000418459 633 ntBASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms