Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATPAF2Q8N5M1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 CCR12P-201ENST00000446203 998 ntBASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.25■□□□□ 0.67
ATPAF2Q8N5M1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 MMP23A-201ENST00000234610 1017 ntBASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 AL031598.1-201ENST00000561511 1773 ntBASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 Z98044.1-201ENST00000632503 1764 ntBASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.24■□□□□ 0.67
ATPAF2Q8N5M1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 TSPY17P-201ENST00000450329 467 ntBASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 BX088651.1-201ENST00000540551 451 ntBASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 NAPSB-206ENST00000562112 1266 ntBASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 AC116562.4-202ENST00000641738 218 ntBASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 KRT8P9-201ENST00000558927 1449 ntBASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATPAF2Q8N5M1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATPAF2Q8N5M1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATPAF2Q8N5M1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.22■□□□□ 0.67
ATPAF2Q8N5M1 MTMR9LP-203ENST00000426597 1545 ntBASIC19.22■□□□□ 0.67
ATPAF2Q8N5M1 GPAT2P1-201ENST00000444924 1672 ntBASIC19.22■□□□□ 0.67
ATPAF2Q8N5M1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.22■□□□□ 0.67
ATPAF2Q8N5M1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.22■□□□□ 0.67
ATPAF2Q8N5M1 AL023284.2-201ENST00000405850 579 ntBASIC19.22■□□□□ 0.67
ATPAF2Q8N5M1 MCCD1P1-208ENST00000445732 328 ntBASIC19.22■□□□□ 0.67
ATPAF2Q8N5M1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.22■□□□□ 0.67
ATPAF2Q8N5M1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.22■□□□□ 0.67
ATPAF2Q8N5M1 AL023803.3-201ENST00000615559 522 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms