Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 AP002807.1-203ENST00000534517 664 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 AC008507.2-201ENST00000588402 1176 ntBASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 AC005785.2-201ENST00000624655 631 ntBASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 NEFHP1-201ENST00000412845 2629 ntBASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00528Q8N1L1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 KRT18P22-201ENST00000402024 1347 ntBASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 NIFKP9-201ENST00000419265 221 ntBASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 AL137013.1-201ENST00000432946 1228 ntBASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 KSR1P1-201ENST00000446298 240 ntBASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 MTND1P8-201ENST00000571424 950 ntBASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 KRT16P1-201ENST00000399124 1418 ntBASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LINC00528Q8N1L1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 AC019070.1-201ENST00000415008 1024 ntBASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 RNU6-775P-201ENST00000459318 96 ntBASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC12.41□□□□□ -0.42
LINC00528Q8N1L1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms