Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.35■□□□□ 0.85
VPS52Q8N1B4 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.35■□□□□ 0.85
VPS52Q8N1B4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 MIR4674-201ENST00000582457 87 ntBASIC20.34■□□□□ 0.85
VPS52Q8N1B4 AC083849.1-201ENST00000615227 514 ntBASIC20.34■□□□□ 0.85
VPS52Q8N1B4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.34■□□□□ 0.85
VPS52Q8N1B4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 HYMAI.1-201ENST00000620949 238 ntBASIC20.33■□□□□ 0.85
VPS52Q8N1B4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS52Q8N1B4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VPS52Q8N1B4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
VPS52Q8N1B4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VPS52Q8N1B4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
VPS52Q8N1B4 AC104417.2-201ENST00000562989 1793 ntBASIC20.33■□□□□ 0.84
VPS52Q8N1B4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.33■□□□□ 0.84
VPS52Q8N1B4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VPS52Q8N1B4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VPS52Q8N1B4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VPS52Q8N1B4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 DUSP5P1-201ENST00000441325 1139 ntBASIC20.32■□□□□ 0.84
VPS52Q8N1B4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 LINC01311-201ENST00000565162 1445 ntBASIC20.32■□□□□ 0.84
VPS52Q8N1B4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.32■□□□□ 0.84
VPS52Q8N1B4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VPS52Q8N1B4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms