Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 AP000692.2-201ENST00000608391 879 ntBASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 AP001412.1-201ENST00000608405 714 ntBASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE9Q8IYJ1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.58■□□□□ 0.57
CPNE9Q8IYJ1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE9Q8IYJ1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
CPNE9Q8IYJ1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.58■□□□□ 0.57
CPNE9Q8IYJ1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE9Q8IYJ1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE9Q8IYJ1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE9Q8IYJ1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.58■□□□□ 0.56
CPNE9Q8IYJ1 AC116562.2-201ENST00000507042 360 ntBASIC18.58■□□□□ 0.56
CPNE9Q8IYJ1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE9Q8IYJ1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CPNE9Q8IYJ1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE9Q8IYJ1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE9Q8IYJ1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.58■□□□□ 0.56
CPNE9Q8IYJ1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.58■□□□□ 0.56
CPNE9Q8IYJ1 ANO7L1-203ENST00000602586 1720 ntBASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 AC008550.1-201ENST00000511500 884 ntBASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 WIZP1-201ENST00000531444 2299 ntBASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 KRT8P3-201ENST00000519669 1449 ntBASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE9Q8IYJ1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 REXO1L10P-201ENST00000615707 1290 ntBASIC18.56■□□□□ 0.56
CPNE9Q8IYJ1 REXO1L12P-201ENST00000622156 912 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms