Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 AL158047.1-201ENST00000445918 881 ntBASIC16.72■□□□□ 0.27
LRRC28Q86X40 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 RPS2P52-201ENST00000469610 820 ntBASIC16.72■□□□□ 0.27
LRRC28Q86X40 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 MTDHP1-201ENST00000605323 784 ntBASIC16.72■□□□□ 0.27
LRRC28Q86X40 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC28Q86X40 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC28Q86X40 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC28Q86X40 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC28Q86X40 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRRC28Q86X40 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC28Q86X40 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC28Q86X40 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC28Q86X40 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC28Q86X40 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC28Q86X40 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC28Q86X40 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC28Q86X40 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC28Q86X40 RPPH1-201ENST00000516869 333 ntBASIC16.71■□□□□ 0.27
LRRC28Q86X40 C1QBPP2-201ENST00000528754 825 ntBASIC16.71■□□□□ 0.27
LRRC28Q86X40 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC28Q86X40 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC28Q86X40 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC28Q86X40 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC28Q86X40 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC28Q86X40 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC28Q86X40 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
LRRC28Q86X40 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC28Q86X40 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 AL359736.2-201ENST00000621992 437 ntBASIC16.7■□□□□ 0.26
LRRC28Q86X40 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 AC066615.1-201ENST00000640911 628 ntBASIC16.7■□□□□ 0.26
LRRC28Q86X40 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 ANO7L1-203ENST00000602586 1720 ntBASIC16.7■□□□□ 0.26
LRRC28Q86X40 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LRRC28Q86X40 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC28Q86X40 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms