Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 AC211486.1-202ENST00000416371 468 ntBASIC15.82■□□□□ 0.12
CSMD2Q7Z408 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 AC211476.1-201ENST00000503899 468 ntBASIC15.82■□□□□ 0.12
CSMD2Q7Z408 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 FAM8A3P-201ENST00000427218 844 ntBASIC15.82■□□□□ 0.12
CSMD2Q7Z408 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD2Q7Z408 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.81■□□□□ 0.12
CSMD2Q7Z408 AC112482.1-201ENST00000492080 688 ntBASIC15.81■□□□□ 0.12
CSMD2Q7Z408 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.81■□□□□ 0.12
CSMD2Q7Z408 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 AL591424.1-201ENST00000442569 1213 ntBASIC15.81■□□□□ 0.12
CSMD2Q7Z408 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 MIR3687-2-201ENST00000577708 61 ntBASIC15.81■□□□□ 0.12
CSMD2Q7Z408 MIR3687-1-201ENST00000614492 61 ntBASIC15.81■□□□□ 0.12
CSMD2Q7Z408 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 AC092720.2-201ENST00000602388 1665 ntBASIC15.81■□□□□ 0.12
CSMD2Q7Z408 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD2Q7Z408 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 AL023284.2-201ENST00000405850 579 ntBASIC15.8■□□□□ 0.12
CSMD2Q7Z408 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 AC008608.2-201ENST00000606089 416 ntBASIC15.8■□□□□ 0.12
CSMD2Q7Z408 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms