Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 GPAT2P1-201ENST00000444924 1672 ntBASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 ECEL1P2-202ENST00000465689 757 ntBASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 MIR4674-201ENST00000582457 87 ntBASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 AC145285.6-201ENST00000604632 637 ntBASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LYSMD3Q7Z3D4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 RCC2P3-201ENST00000418112 1537 ntBASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 KRT8P32-201ENST00000512863 1461 ntBASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 AC128688.1-201ENST00000487626 519 ntBASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD3Q7Z3D4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 FAM87A-204ENST00000613235 858 ntBASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD3Q7Z3D4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD3Q7Z3D4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms