Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 AC091305.1-201ENST00000479476 895 ntBASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 PBX2P1-201ENST00000493219 1291 ntBASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 KRT18P20-201ENST00000548986 1279 ntBASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 CDV3P1-201ENST00000471403 739 ntBASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 AC106739.1-201ENST00000617035 715 ntBASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 AC083906.6-201ENST00000641366 219 ntBASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 KRT8P20-201ENST00000423953 1409 ntBASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00173Q6ZV60 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms