Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RNF111Q6ZNA4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 ESPNP-201ENST00000270691 2015 ntBASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 TUBB8P6-201ENST00000436895 1288 ntBASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF111Q6ZNA4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 KRT16P5-201ENST00000455284 522 ntBASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 PRORSD1P-202ENST00000563365 2154 ntBASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF111Q6ZNA4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms