Protein–RNA interactions for Protein: Q6UWJ1

TMCO3, Transmembrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3Q6UWJ1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 AC124283.5-201ENST00000624661 1809 ntBASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMCO3Q6UWJ1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 TEX21P-204ENST00000641479 1693 ntBASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 AL512353.2-201ENST00000448759 1962 ntBASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 AC009053.2-201ENST00000563701 2365 ntBASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMCO3Q6UWJ1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 UNC93B4-201ENST00000505679 747 ntBASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 UNC93B5-201ENST00000530315 699 ntBASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 AC008687.6-201ENST00000596318 630 ntBASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 AC120498.8-201ENST00000614275 531 ntBASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.34■□□□□ 0.85
TMCO3Q6UWJ1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 KRT18P6-201ENST00000555540 1265 ntBASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMCO3Q6UWJ1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMCO3Q6UWJ1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.33■□□□□ 0.84
TMCO3Q6UWJ1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.33■□□□□ 0.84
TMCO3Q6UWJ1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
TMCO3Q6UWJ1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMCO3Q6UWJ1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMCO3Q6UWJ1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TMCO3Q6UWJ1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TMCO3Q6UWJ1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TMCO3Q6UWJ1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMCO3Q6UWJ1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.33■□□□□ 0.84
TMCO3Q6UWJ1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms