Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 KRT18P21-201ENST00000515767 1272 ntBASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 C2orf69P4-201ENST00000565394 541 ntBASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 AC093525.10-201ENST00000625130 1569 ntBASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXR1Q6PIV2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 AC141586.5-201ENST00000624546 2050 ntBASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 AC239809.2-201ENST00000415381 517 ntBASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXR1Q6PIV2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 LINC01023-201ENST00000606054 436 ntBASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 AC126763.1-201ENST00000552015 2118 ntBASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXR1Q6PIV2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
FOXR1Q6PIV2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXR1Q6PIV2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXR1Q6PIV2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXR1Q6PIV2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXR1Q6PIV2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXR1Q6PIV2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXR1Q6PIV2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXR1Q6PIV2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.53■□□□□ 0.72
FOXR1Q6PIV2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXR1Q6PIV2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms