Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 AL031432.3-201ENST00000607698 485 ntBASIC17.72■□□□□ 0.43
LPCAT4Q643R3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 BCL2-203ENST00000589955 5011 ntBASIC17.71■□□□□ 0.43
LPCAT4Q643R3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 MCRIP2P1-201ENST00000394346 511 ntBASIC17.71■□□□□ 0.43
LPCAT4Q643R3 AC027612.3-201ENST00000413684 1047 ntBASIC17.71■□□□□ 0.43
LPCAT4Q643R3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 AC011676.5-201ENST00000624864 2660 ntBASIC17.71■□□□□ 0.43
LPCAT4Q643R3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 NKILA-202ENST00000614771 2598 ntBASIC17.71■□□□□ 0.43
LPCAT4Q643R3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LPCAT4Q643R3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
LPCAT4Q643R3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LPCAT4Q643R3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.71■□□□□ 0.42
LPCAT4Q643R3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
LPCAT4Q643R3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 LINC02228-203ENST00000641970 1355 ntBASIC17.7■□□□□ 0.42
LPCAT4Q643R3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LPCAT4Q643R3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms