Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
USH1GQ495M9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USH1GQ495M9 STARP1-201ENST00000397973 869 ntBASIC21.56■■□□□ 1.04
USH1GQ495M9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
USH1GQ495M9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
USH1GQ495M9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.56■■□□□ 1.04
USH1GQ495M9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.56■■□□□ 1.04
USH1GQ495M9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
USH1GQ495M9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
USH1GQ495M9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USH1GQ495M9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USH1GQ495M9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.56■■□□□ 1.04
USH1GQ495M9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.56■■□□□ 1.04
USH1GQ495M9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
USH1GQ495M9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
USH1GQ495M9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
USH1GQ495M9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.55■■□□□ 1.04
USH1GQ495M9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USH1GQ495M9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USH1GQ495M9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.55■■□□□ 1.04
USH1GQ495M9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
USH1GQ495M9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USH1GQ495M9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USH1GQ495M9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.55■■□□□ 1.04
USH1GQ495M9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
USH1GQ495M9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USH1GQ495M9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.55■■□□□ 1.04
USH1GQ495M9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.55■■□□□ 1.04
USH1GQ495M9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USH1GQ495M9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
USH1GQ495M9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USH1GQ495M9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
USH1GQ495M9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.54■■□□□ 1.04
USH1GQ495M9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USH1GQ495M9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USH1GQ495M9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USH1GQ495M9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
USH1GQ495M9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.54■■□□□ 1.04
USH1GQ495M9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.54■■□□□ 1.04
USH1GQ495M9 FAM86EP-206ENST00000510506 987 ntBASIC21.54■■□□□ 1.04
USH1GQ495M9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USH1GQ495M9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.54■■□□□ 1.04
USH1GQ495M9 AC083849.1-201ENST00000615227 514 ntBASIC21.54■■□□□ 1.04
USH1GQ495M9 AC112497.1-201ENST00000624824 639 ntBASIC21.54■■□□□ 1.04
USH1GQ495M9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.54■■□□□ 1.04
USH1GQ495M9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USH1GQ495M9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USH1GQ495M9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.54■■□□□ 1.04
USH1GQ495M9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USH1GQ495M9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
USH1GQ495M9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USH1GQ495M9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USH1GQ495M9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USH1GQ495M9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
USH1GQ495M9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
USH1GQ495M9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
USH1GQ495M9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USH1GQ495M9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USH1GQ495M9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USH1GQ495M9 RASA4DP-201ENST00000460726 1199 ntBASIC21.53■■□□□ 1.04
USH1GQ495M9 SEC1P-202ENST00000473944 940 ntBASIC21.53■■□□□ 1.04
USH1GQ495M9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.53■■□□□ 1.04
USH1GQ495M9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
USH1GQ495M9 HYMAI.1-201ENST00000620949 238 ntBASIC21.53■■□□□ 1.04
USH1GQ495M9 AL121956.5-201ENST00000625261 221 ntBASIC21.53■■□□□ 1.04
USH1GQ495M9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USH1GQ495M9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USH1GQ495M9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
USH1GQ495M9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.53■■□□□ 1.04
USH1GQ495M9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USH1GQ495M9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
USH1GQ495M9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USH1GQ495M9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USH1GQ495M9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USH1GQ495M9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
USH1GQ495M9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USH1GQ495M9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USH1GQ495M9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USH1GQ495M9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USH1GQ495M9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
USH1GQ495M9 PCED1CP-201ENST00000419887 785 ntBASIC21.52■■□□□ 1.04
USH1GQ495M9 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.52■■□□□ 1.04
USH1GQ495M9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.52■■□□□ 1.04
USH1GQ495M9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.52■■□□□ 1.04
USH1GQ495M9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.52■■□□□ 1.04
USH1GQ495M9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
USH1GQ495M9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.52■■□□□ 1.04
USH1GQ495M9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.52■■□□□ 1.04
USH1GQ495M9 AC091076.1-201ENST00000610741 619 ntBASIC21.52■■□□□ 1.04
USH1GQ495M9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.52■■□□□ 1.04
USH1GQ495M9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
USH1GQ495M9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.52■■□□□ 1.04
USH1GQ495M9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
USH1GQ495M9 LINC01311-201ENST00000565162 1445 ntBASIC21.52■■□□□ 1.04
USH1GQ495M9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
USH1GQ495M9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USH1GQ495M9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.52■■□□□ 1.04
USH1GQ495M9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
USH1GQ495M9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.52■■□□□ 1.04
USH1GQ495M9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms