Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM71Q2Q1W2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 AP003733.1-201ENST00000491725 852 ntBASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 FOSL1P1-201ENST00000511041 816 ntBASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM71Q2Q1W2 IRX1P1-201ENST00000438849 1838 ntBASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 AC079781.3-201ENST00000449110 356 ntBASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 KRT18P31-201ENST00000506277 1292 ntBASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 AC091304.2-201ENST00000564639 760 ntBASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 MIR3180-4-201ENST00000582223 153 ntBASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 AL121772.3-201ENST00000610840 674 ntBASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 AC006333.2-201ENST00000607957 2099 ntBASIC20.46■□□□□ 0.87
TRIM71Q2Q1W2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 AC090616.6-201ENST00000582640 721 ntBASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 AC034236.2-201ENST00000606662 1610 ntBASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM71Q2Q1W2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 AL160237.2-201ENST00000556165 472 ntBASIC20.44■□□□□ 0.86
TRIM71Q2Q1W2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms