Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL1Q00532 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL1Q00532 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDKL1Q00532 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL1Q00532 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL1Q00532 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL1Q00532 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL1Q00532 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CDKL1Q00532 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL1Q00532 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.49■□□□□ 0.55
CDKL1Q00532 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKL1Q00532 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL1Q00532 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL1Q00532 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKL1Q00532 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL1Q00532 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL1Q00532 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL1Q00532 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL1Q00532 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.48■□□□□ 0.55
CDKL1Q00532 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CDKL1Q00532 FSCN1P1-201ENST00000568912 1481 ntBASIC18.48■□□□□ 0.55
CDKL1Q00532 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL1Q00532 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKL1Q00532 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL1Q00532 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.48■□□□□ 0.55
CDKL1Q00532 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL1Q00532 ABHD17AP1-201ENST00000358206 933 ntBASIC18.48■□□□□ 0.55
CDKL1Q00532 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL1Q00532 AC012618.2-201ENST00000428058 849 ntBASIC18.48■□□□□ 0.55
CDKL1Q00532 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL1Q00532 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL1Q00532 MIR6786-201ENST00000616843 113 ntBASIC18.48■□□□□ 0.55
CDKL1Q00532 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL1Q00532 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL1Q00532 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDKL1Q00532 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CDKL1Q00532 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CDKL1Q00532 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.48■□□□□ 0.55
CDKL1Q00532 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL1Q00532 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL1Q00532 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL1Q00532 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL1Q00532 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL1Q00532 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDKL1Q00532 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKL1Q00532 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKL1Q00532 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 B3GAT3P1-201ENST00000471720 806 ntBASIC18.47■□□□□ 0.55
CDKL1Q00532 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL1Q00532 AP001412.1-201ENST00000608405 714 ntBASIC18.47■□□□□ 0.55
CDKL1Q00532 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CDKL1Q00532 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDKL1Q00532 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 AC020916.1-201ENST00000587762 1774 ntBASIC18.47■□□□□ 0.55
CDKL1Q00532 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKL1Q00532 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKL1Q00532 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL1Q00532 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL1Q00532 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL1Q00532 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL1Q00532 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL1Q00532 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL1Q00532 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL1Q00532 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDKL1Q00532 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.46■□□□□ 0.55
CDKL1Q00532 RPS2P55-201ENST00000397318 883 ntBASIC18.46■□□□□ 0.55
CDKL1Q00532 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKL1Q00532 MESTP1-201ENST00000404287 994 ntBASIC18.46■□□□□ 0.55
CDKL1Q00532 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.46■□□□□ 0.55
CDKL1Q00532 AL158047.1-201ENST00000445918 881 ntBASIC18.46■□□□□ 0.55
CDKL1Q00532 FAM207BP-201ENST00000447172 505 ntBASIC18.46■□□□□ 0.55
CDKL1Q00532 AC008040.2-201ENST00000461049 708 ntBASIC18.46■□□□□ 0.55
CDKL1Q00532 AC011506.1-201ENST00000474329 610 ntBASIC18.46■□□□□ 0.55
CDKL1Q00532 AC107956.1-201ENST00000494359 873 ntBASIC18.46■□□□□ 0.55
CDKL1Q00532 CKBP1-201ENST00000565489 1086 ntBASIC18.46■□□□□ 0.55
CDKL1Q00532 CD177P1-201ENST00000606252 935 ntBASIC18.46■□□□□ 0.55
CDKL1Q00532 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.46■□□□□ 0.55
CDKL1Q00532 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL1Q00532 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
CDKL1Q00532 KRT8P3-201ENST00000519669 1449 ntBASIC18.46■□□□□ 0.55
CDKL1Q00532 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKL1Q00532 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKL1Q00532 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKL1Q00532 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL1Q00532 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL1Q00532 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL1Q00532 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL1Q00532 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKL1Q00532 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKL1Q00532 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms