Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEP78395 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PRAMEP78395 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.95■□□□□ 0.62
PRAMEP78395 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEP78395 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.95■□□□□ 0.62
PRAMEP78395 RPS2P55-201ENST00000397318 883 ntBASIC18.95■□□□□ 0.62
PRAMEP78395 B3GAT3P1-201ENST00000471720 806 ntBASIC18.95■□□□□ 0.62
PRAMEP78395 AC107956.1-201ENST00000494359 873 ntBASIC18.95■□□□□ 0.62
PRAMEP78395 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.95■□□□□ 0.62
PRAMEP78395 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.95■□□□□ 0.62
PRAMEP78395 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.95■□□□□ 0.62
PRAMEP78395 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEP78395 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEP78395 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.95■□□□□ 0.62
PRAMEP78395 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEP78395 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEP78395 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.95■□□□□ 0.62
PRAMEP78395 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEP78395 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 AC093525.10-201ENST00000625130 1569 ntBASIC18.94■□□□□ 0.62
PRAMEP78395 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PRAMEP78395 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.94■□□□□ 0.62
PRAMEP78395 Z98044.1-201ENST00000632503 1764 ntBASIC18.94■□□□□ 0.62
PRAMEP78395 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PRAMEP78395 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.94■□□□□ 0.62
PRAMEP78395 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
PRAMEP78395 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PRAMEP78395 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PRAMEP78395 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PRAMEP78395 AC012618.2-201ENST00000428058 849 ntBASIC18.94■□□□□ 0.62
PRAMEP78395 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 AC011506.1-201ENST00000474329 610 ntBASIC18.94■□□□□ 0.62
PRAMEP78395 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.94■□□□□ 0.62
PRAMEP78395 AC130371.2-201ENST00000619443 611 ntBASIC18.94■□□□□ 0.62
PRAMEP78395 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
PRAMEP78395 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.94■□□□□ 0.62
PRAMEP78395 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.94■□□□□ 0.62
PRAMEP78395 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
PRAMEP78395 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PRAMEP78395 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEP78395 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 AL031598.1-201ENST00000561511 1773 ntBASIC18.93■□□□□ 0.62
PRAMEP78395 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PRAMEP78395 AL512353.2-201ENST00000448759 1962 ntBASIC18.93■□□□□ 0.62
PRAMEP78395 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
PRAMEP78395 LETM1P2-201ENST00000597330 2178 ntBASIC18.93■□□□□ 0.62
PRAMEP78395 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 AL138781.2-201ENST00000617896 1843 ntBASIC18.93■□□□□ 0.62
PRAMEP78395 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.93■□□□□ 0.62
PRAMEP78395 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
PRAMEP78395 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.93■□□□□ 0.62
PRAMEP78395 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.93■□□□□ 0.62
PRAMEP78395 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.93■□□□□ 0.62
PRAMEP78395 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.93■□□□□ 0.62
PRAMEP78395 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.93■□□□□ 0.62
PRAMEP78395 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PRAMEP78395 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.93■□□□□ 0.62
PRAMEP78395 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PRAMEP78395 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEP78395 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
PRAMEP78395 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEP78395 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEP78395 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PRAMEP78395 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.92■□□□□ 0.62
PRAMEP78395 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEP78395 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAMEP78395 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.92■□□□□ 0.62
PRAMEP78395 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEP78395 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAMEP78395 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEP78395 AC008040.2-201ENST00000461049 708 ntBASIC18.92■□□□□ 0.62
PRAMEP78395 AC233702.5-201ENST00000584107 538 ntBASIC18.92■□□□□ 0.62
PRAMEP78395 AL049637.2-201ENST00000641778 930 ntBASIC18.92■□□□□ 0.62
PRAMEP78395 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
PRAMEP78395 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.92■□□□□ 0.62
PRAMEP78395 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEP78395 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEP78395 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEP78395 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms