Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.97■□□□□ 0.95
ASIC1P78348 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.97■□□□□ 0.95
ASIC1P78348 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.97■□□□□ 0.95
ASIC1P78348 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ASIC1P78348 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.97■□□□□ 0.95
ASIC1P78348 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
ASIC1P78348 AC068587.9-201ENST00000641814 219 ntBASIC20.97■□□□□ 0.95
ASIC1P78348 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.97■□□□□ 0.95
ASIC1P78348 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ASIC1P78348 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ASIC1P78348 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ASIC1P78348 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ASIC1P78348 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.97■□□□□ 0.95
ASIC1P78348 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ASIC1P78348 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.97■□□□□ 0.95
ASIC1P78348 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ASIC1P78348 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ASIC1P78348 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ASIC1P78348 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.96■□□□□ 0.95
ASIC1P78348 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ASIC1P78348 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.96■□□□□ 0.95
ASIC1P78348 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.96■□□□□ 0.95
ASIC1P78348 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.96■□□□□ 0.95
ASIC1P78348 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.96■□□□□ 0.95
ASIC1P78348 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ASIC1P78348 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ASIC1P78348 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ASIC1P78348 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
ASIC1P78348 MIR718-201ENST00000390190 70 ntBASIC20.96■□□□□ 0.95
ASIC1P78348 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.96■□□□□ 0.95
ASIC1P78348 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.96■□□□□ 0.95
ASIC1P78348 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 MFAP1P1-201ENST00000442257 1255 ntBASIC20.96■□□□□ 0.95
ASIC1P78348 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.96■□□□□ 0.95
ASIC1P78348 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.96■□□□□ 0.95
ASIC1P78348 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.96■□□□□ 0.95
ASIC1P78348 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.96■□□□□ 0.95
ASIC1P78348 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.96■□□□□ 0.95
ASIC1P78348 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.96■□□□□ 0.95
ASIC1P78348 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ASIC1P78348 AC096733.2-201ENST00000609937 1394 ntBASIC20.96■□□□□ 0.95
ASIC1P78348 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ASIC1P78348 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
ASIC1P78348 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.95■□□□□ 0.95
ASIC1P78348 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ASIC1P78348 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ASIC1P78348 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.95■□□□□ 0.94
ASIC1P78348 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ASIC1P78348 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ASIC1P78348 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ASIC1P78348 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.95■□□□□ 0.94
ASIC1P78348 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
ASIC1P78348 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ASIC1P78348 MTMR9LP-203ENST00000426597 1545 ntBASIC20.95■□□□□ 0.94
ASIC1P78348 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ASIC1P78348 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.95■□□□□ 0.94
ASIC1P78348 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
ASIC1P78348 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ASIC1P78348 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.95■□□□□ 0.94
ASIC1P78348 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ASIC1P78348 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.95■□□□□ 0.94
ASIC1P78348 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.95■□□□□ 0.94
ASIC1P78348 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.95■□□□□ 0.94
ASIC1P78348 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.95■□□□□ 0.94
ASIC1P78348 AC097488.1-201ENST00000507834 756 ntBASIC20.95■□□□□ 0.94
ASIC1P78348 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.95■□□□□ 0.94
ASIC1P78348 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ASIC1P78348 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ASIC1P78348 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ASIC1P78348 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.95■□□□□ 0.94
ASIC1P78348 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ASIC1P78348 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.95■□□□□ 0.94
ASIC1P78348 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.95■□□□□ 0.94
ASIC1P78348 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ASIC1P78348 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.94■□□□□ 0.94
ASIC1P78348 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ASIC1P78348 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.94■□□□□ 0.94
ASIC1P78348 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
ASIC1P78348 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ASIC1P78348 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ASIC1P78348 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ASIC1P78348 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ASIC1P78348 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ASIC1P78348 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ASIC1P78348 TSPY7P-201ENST00000431358 1114 ntBASIC20.94■□□□□ 0.94
ASIC1P78348 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
ASIC1P78348 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ASIC1P78348 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.94■□□□□ 0.94
ASIC1P78348 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.94■□□□□ 0.94
ASIC1P78348 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms