Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
EIF4A1P60842 Z98044.1-201ENST00000632503 1764 ntBASIC24.01■■□□□ 1.43
EIF4A1P60842 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC24.01■■□□□ 1.43
EIF4A1P60842 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
EIF4A1P60842 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC24.01■■□□□ 1.43
EIF4A1P60842 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC24.01■■□□□ 1.43
EIF4A1P60842 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC24.01■■□□□ 1.43
EIF4A1P60842 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC24.01■■□□□ 1.43
EIF4A1P60842 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC24.01■■□□□ 1.43
EIF4A1P60842 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC24.01■■□□□ 1.43
EIF4A1P60842 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC24.01■■□□□ 1.43
EIF4A1P60842 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24.01■■□□□ 1.43
EIF4A1P60842 WDR6-223ENST00000627177 207 ntTSL 2 BASIC24.01■■□□□ 1.43
EIF4A1P60842 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
EIF4A1P60842 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
EIF4A1P60842 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
EIF4A1P60842 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
EIF4A1P60842 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
EIF4A1P60842 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
EIF4A1P60842 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC24■■□□□ 1.43
EIF4A1P60842 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
EIF4A1P60842 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC24■■□□□ 1.43
EIF4A1P60842 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
EIF4A1P60842 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
EIF4A1P60842 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC24■■□□□ 1.43
EIF4A1P60842 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
EIF4A1P60842 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
EIF4A1P60842 MIR662-201ENST00000384847 95 ntBASIC24■■□□□ 1.43
EIF4A1P60842 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24■■□□□ 1.43
EIF4A1P60842 KRT18P56-201ENST00000507275 550 ntBASIC24■■□□□ 1.43
EIF4A1P60842 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC24■■□□□ 1.43
EIF4A1P60842 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC24■■□□□ 1.43
EIF4A1P60842 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24■■□□□ 1.43
EIF4A1P60842 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
EIF4A1P60842 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 AL162741.1-201ENST00000565563 1558 ntBASIC23.99■■□□□ 1.43
EIF4A1P60842 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
EIF4A1P60842 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
EIF4A1P60842 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.99■■□□□ 1.43
EIF4A1P60842 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.99■■□□□ 1.43
EIF4A1P60842 NPAP1P7-201ENST00000613027 823 ntBASIC23.99■■□□□ 1.43
EIF4A1P60842 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.99■■□□□ 1.43
EIF4A1P60842 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.99■■□□□ 1.43
EIF4A1P60842 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.99■■□□□ 1.43
EIF4A1P60842 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.99■■□□□ 1.43
EIF4A1P60842 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
EIF4A1P60842 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
EIF4A1P60842 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.98■■□□□ 1.43
EIF4A1P60842 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.98■■□□□ 1.43
EIF4A1P60842 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
EIF4A1P60842 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.98■■□□□ 1.43
EIF4A1P60842 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
EIF4A1P60842 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
EIF4A1P60842 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
EIF4A1P60842 ATP5G2P1-201ENST00000433580 426 ntBASIC23.98■■□□□ 1.43
EIF4A1P60842 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC23.98■■□□□ 1.43
EIF4A1P60842 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
EIF4A1P60842 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.98■■□□□ 1.43
EIF4A1P60842 AC011498.5-201ENST00000592027 486 ntBASIC23.98■■□□□ 1.43
EIF4A1P60842 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.98■■□□□ 1.43
EIF4A1P60842 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
EIF4A1P60842 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.98■■□□□ 1.43
EIF4A1P60842 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
EIF4A1P60842 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
EIF4A1P60842 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
EIF4A1P60842 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.98■■□□□ 1.43
EIF4A1P60842 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
EIF4A1P60842 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
EIF4A1P60842 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
EIF4A1P60842 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
EIF4A1P60842 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
EIF4A1P60842 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.97■■□□□ 1.43
EIF4A1P60842 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.97■■□□□ 1.43
EIF4A1P60842 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
EIF4A1P60842 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.97■■□□□ 1.43
EIF4A1P60842 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
EIF4A1P60842 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
EIF4A1P60842 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
EIF4A1P60842 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
EIF4A1P60842 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
EIF4A1P60842 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
EIF4A1P60842 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
EIF4A1P60842 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.97■■□□□ 1.43
EIF4A1P60842 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
EIF4A1P60842 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
EIF4A1P60842 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
EIF4A1P60842 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
EIF4A1P60842 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
EIF4A1P60842 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.96■■□□□ 1.43
EIF4A1P60842 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms