Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.76■□□□□ 0.75
ERVFC1P60507 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ERVFC1P60507 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ERVFC1P60507 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ERVFC1P60507 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.76■□□□□ 0.75
ERVFC1P60507 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.76■□□□□ 0.75
ERVFC1P60507 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.76■□□□□ 0.75
ERVFC1P60507 GPR32P1-201ENST00000601788 811 ntBASIC19.76■□□□□ 0.75
ERVFC1P60507 AC006538.3-201ENST00000612495 578 ntBASIC19.76■□□□□ 0.75
ERVFC1P60507 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.76■□□□□ 0.75
ERVFC1P60507 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERVFC1P60507 AC006333.2-201ENST00000607957 2099 ntBASIC19.75■□□□□ 0.75
ERVFC1P60507 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.75■□□□□ 0.75
ERVFC1P60507 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.75■□□□□ 0.75
ERVFC1P60507 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ERVFC1P60507 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.75■□□□□ 0.75
ERVFC1P60507 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.75■□□□□ 0.75
ERVFC1P60507 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.75■□□□□ 0.75
ERVFC1P60507 Z69720.1-201ENST00000601483 472 ntBASIC19.75■□□□□ 0.75
ERVFC1P60507 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.75■□□□□ 0.75
ERVFC1P60507 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ERVFC1P60507 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERVFC1P60507 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERVFC1P60507 KRT8P32-201ENST00000512863 1461 ntBASIC19.74■□□□□ 0.75
ERVFC1P60507 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.74■□□□□ 0.75
ERVFC1P60507 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERVFC1P60507 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERVFC1P60507 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERVFC1P60507 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.74■□□□□ 0.75
ERVFC1P60507 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.74■□□□□ 0.75
ERVFC1P60507 AKR1C7P-201ENST00000305623 895 ntBASIC19.74■□□□□ 0.75
ERVFC1P60507 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERVFC1P60507 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERVFC1P60507 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.74■□□□□ 0.75
ERVFC1P60507 IGHGP-201ENST00000390555 1178 ntBASIC19.74■□□□□ 0.75
ERVFC1P60507 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERVFC1P60507 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.74■□□□□ 0.75
ERVFC1P60507 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.74■□□□□ 0.75
ERVFC1P60507 AL662844.1-201ENST00000546340 181 ntBASIC19.74■□□□□ 0.75
ERVFC1P60507 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.74■□□□□ 0.75
ERVFC1P60507 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.74■□□□□ 0.75
ERVFC1P60507 AC124864.1-201ENST00000623408 392 ntBASIC19.74■□□□□ 0.75
ERVFC1P60507 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.74■□□□□ 0.75
ERVFC1P60507 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERVFC1P60507 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ERVFC1P60507 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERVFC1P60507 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERVFC1P60507 HLA-A-201ENST00000376802 1334 ntBASIC19.74■□□□□ 0.75
ERVFC1P60507 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERVFC1P60507 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.73■□□□□ 0.75
ERVFC1P60507 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 TREX1-205ENST00000625293 1783 ntBASIC19.73■□□□□ 0.75
ERVFC1P60507 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.73■□□□□ 0.75
ERVFC1P60507 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ERVFC1P60507 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ERVFC1P60507 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ERVFC1P60507 RN7SL606P-201ENST00000472779 293 ntBASIC19.73■□□□□ 0.75
ERVFC1P60507 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.73■□□□□ 0.75
ERVFC1P60507 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 AL592071.1-201ENST00000611956 408 ntBASIC19.73■□□□□ 0.75
ERVFC1P60507 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
ERVFC1P60507 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERVFC1P60507 AC034236.2-201ENST00000606662 1610 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms