Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PER3P56645 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
PER3P56645 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.37■□□□□ 0.37
PER3P56645 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 INGX-201ENST00000359239 846 ntBASIC17.37■□□□□ 0.37
PER3P56645 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.37■□□□□ 0.37
PER3P56645 AC026396.1-201ENST00000419388 421 ntBASIC17.37■□□□□ 0.37
PER3P56645 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.37■□□□□ 0.37
PER3P56645 AC096733.2-201ENST00000609937 1394 ntBASIC17.37■□□□□ 0.37
PER3P56645 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.37■□□□□ 0.37
PER3P56645 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.37■□□□□ 0.37
PER3P56645 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PER3P56645 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 AC099778.1-201ENST00000568593 1911 ntBASIC17.37■□□□□ 0.37
PER3P56645 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PER3P56645 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PER3P56645 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PER3P56645 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PER3P56645 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PER3P56645 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PER3P56645 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PER3P56645 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.36■□□□□ 0.37
PER3P56645 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PER3P56645 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PER3P56645 HCG4P8-203ENST00000443049 980 ntBASIC17.36■□□□□ 0.37
PER3P56645 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.36■□□□□ 0.37
PER3P56645 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.36■□□□□ 0.37
PER3P56645 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PER3P56645 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.36■□□□□ 0.37
PER3P56645 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PER3P56645 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.36■□□□□ 0.37
PER3P56645 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.36■□□□□ 0.37
PER3P56645 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.36■□□□□ 0.37
PER3P56645 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PER3P56645 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.36■□□□□ 0.37
PER3P56645 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PER3P56645 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.36■□□□□ 0.37
PER3P56645 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.36■□□□□ 0.37
PER3P56645 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PER3P56645 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PER3P56645 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PER3P56645 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PER3P56645 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PER3P56645 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.36■□□□□ 0.37
PER3P56645 TMEM179-206ENST00000616017 1645 ntBASIC17.36■□□□□ 0.37
PER3P56645 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PER3P56645 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.35■□□□□ 0.37
PER3P56645 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PER3P56645 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 AC093503.3-201ENST00000624917 2352 ntBASIC17.35■□□□□ 0.37
PER3P56645 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.35■□□□□ 0.37
PER3P56645 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PER3P56645 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.35■□□□□ 0.37
PER3P56645 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.35■□□□□ 0.37
PER3P56645 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.35■□□□□ 0.37
PER3P56645 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.35■□□□□ 0.37
PER3P56645 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.35■□□□□ 0.37
PER3P56645 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PER3P56645 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
PER3P56645 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.35■□□□□ 0.37
PER3P56645 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.35■□□□□ 0.37
PER3P56645 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.35■□□□□ 0.37
PER3P56645 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PER3P56645 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PER3P56645 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PER3P56645 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.35■□□□□ 0.37
PER3P56645 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PER3P56645 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms