Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CDH6P55285 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CDH6P55285 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH6P55285 AL355355.2-201ENST00000442321 338 ntBASIC19.55■□□□□ 0.72
CDH6P55285 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CDH6P55285 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH6P55285 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.55■□□□□ 0.72
CDH6P55285 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.55■□□□□ 0.72
CDH6P55285 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH6P55285 SLC25A1P4-201ENST00000567977 778 ntBASIC19.55■□□□□ 0.72
CDH6P55285 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.55■□□□□ 0.72
CDH6P55285 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.55■□□□□ 0.72
CDH6P55285 DGCR10-201ENST00000609839 495 ntBASIC19.55■□□□□ 0.72
CDH6P55285 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH6P55285 AC068587.9-201ENST00000641814 219 ntBASIC19.55■□□□□ 0.72
CDH6P55285 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDH6P55285 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH6P55285 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDH6P55285 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH6P55285 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH6P55285 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH6P55285 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH6P55285 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CDH6P55285 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH6P55285 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH6P55285 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CDH6P55285 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH6P55285 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH6P55285 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.54■□□□□ 0.72
CDH6P55285 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH6P55285 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH6P55285 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.54■□□□□ 0.72
CDH6P55285 AC026471.5-201ENST00000615068 467 ntBASIC19.54■□□□□ 0.72
CDH6P55285 REXO1L10P-201ENST00000615707 1290 ntBASIC19.54■□□□□ 0.72
CDH6P55285 REXO1L12P-201ENST00000622156 912 ntBASIC19.54■□□□□ 0.72
CDH6P55285 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH6P55285 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH6P55285 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH6P55285 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH6P55285 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH6P55285 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH6P55285 AC096733.2-201ENST00000609937 1394 ntBASIC19.54■□□□□ 0.72
CDH6P55285 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDH6P55285 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH6P55285 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH6P55285 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH6P55285 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH6P55285 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH6P55285 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH6P55285 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH6P55285 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.53■□□□□ 0.72
CDH6P55285 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH6P55285 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH6P55285 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH6P55285 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH6P55285 MTMR9LP-203ENST00000426597 1545 ntBASIC19.53■□□□□ 0.72
CDH6P55285 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH6P55285 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.53■□□□□ 0.72
CDH6P55285 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CDH6P55285 MFAP1P1-201ENST00000442257 1255 ntBASIC19.53■□□□□ 0.72
CDH6P55285 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH6P55285 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.53■□□□□ 0.72
CDH6P55285 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH6P55285 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH6P55285 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.53■□□□□ 0.72
CDH6P55285 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH6P55285 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH6P55285 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CDH6P55285 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CDH6P55285 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CDH6P55285 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH6P55285 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH6P55285 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH6P55285 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH6P55285 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH6P55285 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH6P55285 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH6P55285 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH6P55285 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH6P55285 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.52■□□□□ 0.72
CDH6P55285 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH6P55285 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDH6P55285 AC009113.1-201ENST00000570267 2443 ntBASIC19.52■□□□□ 0.72
CDH6P55285 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH6P55285 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH6P55285 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH6P55285 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH6P55285 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH6P55285 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms