Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC4P55056 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC4P55056 GPAT2P1-201ENST00000444924 1672 ntBASIC13.79□□□□□ -0.2
APOC4P55056 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 AC141586.3-201ENST00000562166 1838 ntBASIC13.78□□□□□ -0.2
APOC4P55056 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 FP475955.4-201ENST00000623131 1990 ntBASIC13.78□□□□□ -0.2
APOC4P55056 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.78□□□□□ -0.2
APOC4P55056 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.78□□□□□ -0.2
APOC4P55056 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.78□□□□□ -0.2
APOC4P55056 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.78□□□□□ -0.2
APOC4P55056 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.78□□□□□ -0.2
APOC4P55056 AC008622.2-201ENST00000617006 1229 ntBASIC13.78□□□□□ -0.2
APOC4P55056 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
APOC4P55056 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC4P55056 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 PKD1P1-201ENST00000458669 6805 ntBASIC13.78□□□□□ -0.2
APOC4P55056 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.78□□□□□ -0.2
APOC4P55056 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
APOC4P55056 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
APOC4P55056 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
APOC4P55056 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC4P55056 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
APOC4P55056 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
APOC4P55056 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.77□□□□□ -0.21
APOC4P55056 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC4P55056 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOC4P55056 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.77□□□□□ -0.21
APOC4P55056 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
APOC4P55056 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC4P55056 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC4P55056 MIR4674-201ENST00000582457 87 ntBASIC13.77□□□□□ -0.21
APOC4P55056 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.77□□□□□ -0.21
APOC4P55056 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
APOC4P55056 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
APOC4P55056 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
APOC4P55056 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC4P55056 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APOC4P55056 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APOC4P55056 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC4P55056 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.76□□□□□ -0.21
APOC4P55056 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
APOC4P55056 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 AC036111.1-201ENST00000533973 1582 ntBASIC13.76□□□□□ -0.21
APOC4P55056 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APOC4P55056 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC4P55056 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC4P55056 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC4P55056 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.76□□□□□ -0.21
APOC4P55056 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC4P55056 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.76□□□□□ -0.21
APOC4P55056 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.76□□□□□ -0.21
APOC4P55056 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
APOC4P55056 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC4P55056 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APOC4P55056 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.76□□□□□ -0.21
APOC4P55056 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC4P55056 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.76□□□□□ -0.21
APOC4P55056 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms