Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PMS1P54277 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.69■□□□□ 0.9
PMS1P54277 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PMS1P54277 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 AL158047.1-201ENST00000445918 881 ntBASIC20.69■□□□□ 0.9
PMS1P54277 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PMS1P54277 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.69■□□□□ 0.9
PMS1P54277 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.69■□□□□ 0.9
PMS1P54277 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.69■□□□□ 0.9
PMS1P54277 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.69■□□□□ 0.9
PMS1P54277 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.69■□□□□ 0.9
PMS1P54277 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.69■□□□□ 0.9
PMS1P54277 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PMS1P54277 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
PMS1P54277 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS1P54277 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PMS1P54277 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.69■□□□□ 0.9
PMS1P54277 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PMS1P54277 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS1P54277 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.68■□□□□ 0.9
PMS1P54277 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS1P54277 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.68■□□□□ 0.9
PMS1P54277 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PMS1P54277 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS1P54277 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.68■□□□□ 0.9
PMS1P54277 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PMS1P54277 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS1P54277 AP000692.2-201ENST00000608391 879 ntBASIC20.68■□□□□ 0.9
PMS1P54277 AC008622.2-201ENST00000617006 1229 ntBASIC20.68■□□□□ 0.9
PMS1P54277 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS1P54277 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS1P54277 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PMS1P54277 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS1P54277 AC018470.1-201ENST00000624790 3129 ntBASIC20.68■□□□□ 0.9
PMS1P54277 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS1P54277 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS1P54277 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
PMS1P54277 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PMS1P54277 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PMS1P54277 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.67■□□□□ 0.9
PMS1P54277 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PMS1P54277 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.67■□□□□ 0.9
PMS1P54277 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PMS1P54277 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PMS1P54277 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
PMS1P54277 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.67■□□□□ 0.9
PMS1P54277 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PMS1P54277 ABHD17AP1-201ENST00000358206 933 ntBASIC20.67■□□□□ 0.9
PMS1P54277 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.67■□□□□ 0.9
PMS1P54277 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PMS1P54277 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.67■□□□□ 0.9
PMS1P54277 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.67■□□□□ 0.9
PMS1P54277 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.67■□□□□ 0.9
PMS1P54277 AC113410.3-201ENST00000623366 203 ntBASIC20.67■□□□□ 0.9
PMS1P54277 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.67■□□□□ 0.9
PMS1P54277 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PMS1P54277 RCC2P3-201ENST00000418112 1537 ntBASIC20.67■□□□□ 0.9
PMS1P54277 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PMS1P54277 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.67■□□□□ 0.9
PMS1P54277 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PMS1P54277 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.67■□□□□ 0.9
PMS1P54277 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PMS1P54277 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PMS1P54277 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.67■□□□□ 0.9
PMS1P54277 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.66■□□□□ 0.9
PMS1P54277 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.66■□□□□ 0.9
PMS1P54277 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.66■□□□□ 0.9
PMS1P54277 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PMS1P54277 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.66■□□□□ 0.9
PMS1P54277 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PMS1P54277 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.66■□□□□ 0.9
PMS1P54277 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.66■□□□□ 0.9
PMS1P54277 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.66■□□□□ 0.9
PMS1P54277 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.66■□□□□ 0.9
PMS1P54277 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 FSCN1P1-201ENST00000568912 1481 ntBASIC20.66■□□□□ 0.9
PMS1P54277 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS1P54277 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms