Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 KRT18P28-201ENST00000453838 1332 ntBASIC18.7■□□□□ 0.58
NUBP1P53384 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NUBP1P53384 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.69■□□□□ 0.58
NUBP1P53384 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NUBP1P53384 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.69■□□□□ 0.58
NUBP1P53384 HNRNPDP1-201ENST00000439535 754 ntBASIC18.69■□□□□ 0.58
NUBP1P53384 CYMP-203ENST00000474680 1263 ntBASIC18.69■□□□□ 0.58
NUBP1P53384 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 AC026616.1-201ENST00000523157 525 ntBASIC18.69■□□□□ 0.58
NUBP1P53384 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.69■□□□□ 0.58
NUBP1P53384 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.69■□□□□ 0.58
NUBP1P53384 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 AL353708.1-201ENST00000567904 1257 ntBASIC18.69■□□□□ 0.58
NUBP1P53384 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC18.69■□□□□ 0.58
NUBP1P53384 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NUBP1P53384 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.69■□□□□ 0.58
NUBP1P53384 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.69■□□□□ 0.58
NUBP1P53384 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.69■□□□□ 0.58
NUBP1P53384 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NUBP1P53384 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUBP1P53384 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.68■□□□□ 0.58
NUBP1P53384 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
NUBP1P53384 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUBP1P53384 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUBP1P53384 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUBP1P53384 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUBP1P53384 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC18.68■□□□□ 0.58
NUBP1P53384 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC18.68■□□□□ 0.58
NUBP1P53384 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.68■□□□□ 0.58
NUBP1P53384 AL392088.1-201ENST00000428364 670 ntBASIC18.68■□□□□ 0.58
NUBP1P53384 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.68■□□□□ 0.58
NUBP1P53384 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.68■□□□□ 0.58
NUBP1P53384 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.68■□□□□ 0.58
NUBP1P53384 AC002347.1-201ENST00000569543 541 ntBASIC18.68■□□□□ 0.58
NUBP1P53384 MTDHP5-201ENST00000598980 586 ntBASIC18.68■□□□□ 0.58
NUBP1P53384 AL137246.1-201ENST00000607072 977 ntBASIC18.68■□□□□ 0.58
NUBP1P53384 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC18.68■□□□□ 0.58
NUBP1P53384 Z83851.2-201ENST00000609564 659 ntBASIC18.68■□□□□ 0.58
NUBP1P53384 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUBP1P53384 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.68■□□□□ 0.58
NUBP1P53384 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.68■□□□□ 0.58
NUBP1P53384 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUBP1P53384 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUBP1P53384 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUBP1P53384 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUBP1P53384 AL353692.3-201ENST00000407031 1396 ntBASIC18.68■□□□□ 0.58
NUBP1P53384 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 AC007225.1-201ENST00000566331 1836 ntBASIC18.67■□□□□ 0.58
NUBP1P53384 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NUBP1P53384 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NUBP1P53384 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NUBP1P53384 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 FAM8A3P-201ENST00000427218 844 ntBASIC18.67■□□□□ 0.58
NUBP1P53384 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.67■□□□□ 0.58
NUBP1P53384 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 AC091607.1-201ENST00000490318 1060 ntBASIC18.67■□□□□ 0.58
NUBP1P53384 NPM1P28-201ENST00000492269 840 ntBASIC18.67■□□□□ 0.58
NUBP1P53384 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.67■□□□□ 0.58
NUBP1P53384 RFPL4AP1-201ENST00000530883 850 ntBASIC18.67■□□□□ 0.58
NUBP1P53384 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.67■□□□□ 0.58
NUBP1P53384 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 AC135178.5-201ENST00000602597 674 ntBASIC18.67■□□□□ 0.58
NUBP1P53384 AL157762.1-201ENST00000619612 415 ntBASIC18.67■□□□□ 0.58
NUBP1P53384 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUBP1P53384 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUBP1P53384 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NUBP1P53384 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUBP1P53384 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUBP1P53384 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUBP1P53384 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUBP1P53384 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUBP1P53384 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.66■□□□□ 0.58
NUBP1P53384 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUBP1P53384 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms