Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GBX2P52951 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
GBX2P52951 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.75■□□□□ 0.27
GBX2P52951 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.75■□□□□ 0.27
GBX2P52951 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GBX2P52951 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GBX2P52951 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GBX2P52951 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GBX2P52951 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GBX2P52951 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
GBX2P52951 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 AL162741.1-201ENST00000565563 1558 ntBASIC16.74■□□□□ 0.27
GBX2P52951 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.74■□□□□ 0.27
GBX2P52951 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.74■□□□□ 0.27
GBX2P52951 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.74■□□□□ 0.27
GBX2P52951 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GBX2P52951 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
GBX2P52951 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GBX2P52951 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GBX2P52951 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GBX2P52951 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GBX2P52951 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GBX2P52951 AC092368.3-202ENST00000574180 1591 ntBASIC16.73■□□□□ 0.27
GBX2P52951 AC106820.2-201ENST00000563775 3264 ntBASIC16.73■□□□□ 0.27
GBX2P52951 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.73■□□□□ 0.27
GBX2P52951 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
GBX2P52951 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GBX2P52951 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GBX2P52951 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GBX2P52951 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GBX2P52951 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
GBX2P52951 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GBX2P52951 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GBX2P52951 MIPEPP3-201ENST00000412105 444 ntBASIC16.73■□□□□ 0.27
GBX2P52951 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.73■□□□□ 0.27
GBX2P52951 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
GBX2P52951 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.73■□□□□ 0.27
GBX2P52951 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.73■□□□□ 0.27
GBX2P52951 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GBX2P52951 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.73■□□□□ 0.27
GBX2P52951 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.73■□□□□ 0.27
GBX2P52951 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.73■□□□□ 0.27
GBX2P52951 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GBX2P52951 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GBX2P52951 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GBX2P52951 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
GBX2P52951 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GBX2P52951 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 AC126763.1-201ENST00000552015 2118 ntBASIC16.72■□□□□ 0.27
GBX2P52951 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GBX2P52951 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
GBX2P52951 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.72■□□□□ 0.27
GBX2P52951 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.72■□□□□ 0.27
GBX2P52951 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GBX2P52951 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GBX2P52951 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.72■□□□□ 0.27
GBX2P52951 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.72■□□□□ 0.27
GBX2P52951 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.72■□□□□ 0.27
GBX2P52951 AC080038.1-201ENST00000611274 1154 ntBASIC16.72■□□□□ 0.27
GBX2P52951 AL050303.2-201ENST00000619798 666 ntBASIC16.72■□□□□ 0.27
GBX2P52951 AL121829.2-201ENST00000620908 328 ntBASIC16.72■□□□□ 0.27
GBX2P52951 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.72■□□□□ 0.27
GBX2P52951 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
GBX2P52951 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.72■□□□□ 0.27
GBX2P52951 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.72■□□□□ 0.27
GBX2P52951 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.72■□□□□ 0.27
GBX2P52951 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.72■□□□□ 0.27
GBX2P52951 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.72■□□□□ 0.27
GBX2P52951 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GBX2P52951 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
GBX2P52951 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.72■□□□□ 0.27
GBX2P52951 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms