Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.67■□□□□ 0.26
SRP9P49458 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.67■□□□□ 0.26
SRP9P49458 AC110285.5-201ENST00000611501 352 ntBASIC16.67■□□□□ 0.26
SRP9P49458 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP9P49458 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SRP9P49458 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP9P49458 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.67■□□□□ 0.26
SRP9P49458 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRP9P49458 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP9P49458 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.67■□□□□ 0.26
SRP9P49458 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SRP9P49458 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRP9P49458 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP9P49458 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP9P49458 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP9P49458 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.66■□□□□ 0.26
SRP9P49458 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP9P49458 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP9P49458 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP9P49458 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SRP9P49458 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP9P49458 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.66■□□□□ 0.26
SRP9P49458 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
SRP9P49458 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SRP9P49458 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SRP9P49458 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP9P49458 AC124016.1-201ENST00000609552 612 ntBASIC16.66■□□□□ 0.26
SRP9P49458 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SRP9P49458 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP9P49458 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.66■□□□□ 0.26
SRP9P49458 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SRP9P49458 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRP9P49458 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SRP9P49458 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.65■□□□□ 0.26
SRP9P49458 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SRP9P49458 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 AC093525.10-201ENST00000625130 1569 ntBASIC16.65■□□□□ 0.26
SRP9P49458 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
SRP9P49458 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.65■□□□□ 0.26
SRP9P49458 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SRP9P49458 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SRP9P49458 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.65■□□□□ 0.26
SRP9P49458 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.65■□□□□ 0.26
SRP9P49458 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SRP9P49458 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRP9P49458 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SRP9P49458 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SRP9P49458 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.65■□□□□ 0.26
SRP9P49458 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SRP9P49458 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.64■□□□□ 0.25
SRP9P49458 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.64■□□□□ 0.25
SRP9P49458 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SRP9P49458 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SRP9P49458 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.64■□□□□ 0.25
SRP9P49458 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRP9P49458 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.64■□□□□ 0.25
SRP9P49458 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.64■□□□□ 0.25
SRP9P49458 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRP9P49458 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.64■□□□□ 0.25
SRP9P49458 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.64■□□□□ 0.25
SRP9P49458 TUBB8P6-201ENST00000436895 1288 ntBASIC16.64■□□□□ 0.25
SRP9P49458 AL158047.1-201ENST00000445918 881 ntBASIC16.64■□□□□ 0.25
SRP9P49458 AL359736.2-201ENST00000621992 437 ntBASIC16.64■□□□□ 0.25
SRP9P49458 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.64■□□□□ 0.25
SRP9P49458 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.64■□□□□ 0.25
SRP9P49458 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRP9P49458 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRP9P49458 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRP9P49458 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SRP9P49458 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRP9P49458 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms