Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 KRT8P45-201ENST00000414328 1447 ntBASIC18.15■□□□□ 0.5
SLC6A12P48065 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SLC6A12P48065 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SLC6A12P48065 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC6A12P48065 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC6A12P48065 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC6A12P48065 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.14■□□□□ 0.49
SLC6A12P48065 AL355075.4-201ENST00000554988 638 ntBASIC18.14■□□□□ 0.49
SLC6A12P48065 MIR4497-201ENST00000583208 89 ntBASIC18.14■□□□□ 0.49
SLC6A12P48065 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 AL023803.3-201ENST00000615559 522 ntBASIC18.14■□□□□ 0.49
SLC6A12P48065 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC6A12P48065 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 AC126763.1-201ENST00000552015 2118 ntBASIC18.14■□□□□ 0.49
SLC6A12P48065 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SLC6A12P48065 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC6A12P48065 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A12P48065 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC6A12P48065 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC6A12P48065 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC6A12P48065 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SLC6A12P48065 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC6A12P48065 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SLC6A12P48065 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SLC6A12P48065 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC6A12P48065 MIR4674-201ENST00000582457 87 ntBASIC18.13■□□□□ 0.49
SLC6A12P48065 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SLC6A12P48065 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC6A12P48065 KRT17P2-201ENST00000300992 1314 ntBASIC18.13■□□□□ 0.49
SLC6A12P48065 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SLC6A12P48065 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A12P48065 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SLC6A12P48065 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A12P48065 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A12P48065 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A12P48065 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A12P48065 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A12P48065 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SLC6A12P48065 SLC25A1P2-201ENST00000430693 912 ntBASIC18.12■□□□□ 0.49
SLC6A12P48065 MCCD1P1-208ENST00000445732 328 ntBASIC18.12■□□□□ 0.49
SLC6A12P48065 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC6A12P48065 KRT18P41-201ENST00000518924 1277 ntBASIC18.12■□□□□ 0.49
SLC6A12P48065 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC6A12P48065 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC6A12P48065 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A12P48065 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC6A12P48065 AC112777.1-201ENST00000540175 1423 ntBASIC18.12■□□□□ 0.49
SLC6A12P48065 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A12P48065 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SLC6A12P48065 NEFHP1-201ENST00000412845 2629 ntBASIC18.12■□□□□ 0.49
SLC6A12P48065 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A12P48065 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
SLC6A12P48065 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 AL390955.1-201ENST00000428694 934 ntBASIC18.11■□□□□ 0.49
SLC6A12P48065 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.11■□□□□ 0.49
SLC6A12P48065 MYC-208ENST00000641036 567 ntBASIC18.11■□□□□ 0.49
SLC6A12P48065 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SLC6A12P48065 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC6A12P48065 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC6A12P48065 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SLC6A12P48065 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A12P48065 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC6A12P48065 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLC6A12P48065 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms