Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
MMP13P45452 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MMP13P45452 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP13P45452 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP13P45452 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP13P45452 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MMP13P45452 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MMP13P45452 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP13P45452 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP13P45452 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.55■□□□□ 0.72
MMP13P45452 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.55■□□□□ 0.72
MMP13P45452 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
MMP13P45452 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.55■□□□□ 0.72
MMP13P45452 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MMP13P45452 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP13P45452 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MMP13P45452 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP13P45452 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MMP13P45452 AL512353.2-201ENST00000448759 1962 ntBASIC19.55■□□□□ 0.72
MMP13P45452 KRT8P41-201ENST00000533985 1514 ntBASIC19.55■□□□□ 0.72
MMP13P45452 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP13P45452 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MMP13P45452 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP13P45452 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP13P45452 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MMP13P45452 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
MMP13P45452 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.54■□□□□ 0.72
MMP13P45452 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
MMP13P45452 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.54■□□□□ 0.72
MMP13P45452 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.54■□□□□ 0.72
MMP13P45452 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP13P45452 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.54■□□□□ 0.72
MMP13P45452 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.54■□□□□ 0.72
MMP13P45452 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.54■□□□□ 0.72
MMP13P45452 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP13P45452 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
MMP13P45452 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP13P45452 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP13P45452 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
MMP13P45452 RCC2P6-201ENST00000526625 1557 ntBASIC19.53■□□□□ 0.72
MMP13P45452 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
MMP13P45452 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.53■□□□□ 0.72
MMP13P45452 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.53■□□□□ 0.72
MMP13P45452 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.53■□□□□ 0.72
MMP13P45452 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
MMP13P45452 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP13P45452 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
MMP13P45452 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.52■□□□□ 0.72
MMP13P45452 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.52■□□□□ 0.72
MMP13P45452 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.52■□□□□ 0.72
MMP13P45452 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.52■□□□□ 0.72
MMP13P45452 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
MMP13P45452 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
MMP13P45452 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP13P45452 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.52■□□□□ 0.71
MMP13P45452 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.52■□□□□ 0.71
MMP13P45452 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MMP13P45452 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms