Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC1A1P43005 AC112777.1-201ENST00000540175 1423 ntBASIC19.68■□□□□ 0.74
SLC1A1P43005 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.68■□□□□ 0.74
SLC1A1P43005 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC1A1P43005 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
SLC1A1P43005 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SLC1A1P43005 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SLC1A1P43005 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.68■□□□□ 0.74
SLC1A1P43005 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC1A1P43005 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A1P43005 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC1A1P43005 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SLC1A1P43005 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC1A1P43005 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC1A1P43005 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.67■□□□□ 0.74
SLC1A1P43005 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC1A1P43005 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC1A1P43005 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC1A1P43005 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SLC1A1P43005 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC1A1P43005 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SLC1A1P43005 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 FAM207BP-201ENST00000447172 505 ntBASIC19.67■□□□□ 0.74
SLC1A1P43005 AC008040.2-201ENST00000461049 708 ntBASIC19.67■□□□□ 0.74
SLC1A1P43005 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SLC1A1P43005 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC1A1P43005 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC1A1P43005 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLC1A1P43005 MIR4651-201ENST00000582622 73 ntBASIC19.67■□□□□ 0.74
SLC1A1P43005 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC1A1P43005 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC1A1P43005 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC1A1P43005 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SLC1A1P43005 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A1P43005 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC1A1P43005 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC1A1P43005 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC1A1P43005 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC1A1P43005 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC1A1P43005 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC1A1P43005 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC1A1P43005 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC1A1P43005 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC1A1P43005 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC1A1P43005 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SLC1A1P43005 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A1P43005 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC1A1P43005 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
SLC1A1P43005 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC1A1P43005 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC1A1P43005 AL357033.4-201ENST00000617703 1807 ntBASIC19.65■□□□□ 0.74
SLC1A1P43005 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC1A1P43005 AC007613.1-201ENST00000572811 2597 ntBASIC19.65■□□□□ 0.74
SLC1A1P43005 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC1A1P43005 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC1A1P43005 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A1P43005 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC1A1P43005 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC1A1P43005 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A1P43005 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SLC1A1P43005 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms