Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SLC1A2P43004 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SLC1A2P43004 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SLC1A2P43004 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A2P43004 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC1A2P43004 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A2P43004 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SLC1A2P43004 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A2P43004 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A2P43004 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A2P43004 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A2P43004 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC1A2P43004 AC135050.7-201ENST00000624508 2218 ntBASIC18.73■□□□□ 0.59
SLC1A2P43004 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A2P43004 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC1A2P43004 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC1A2P43004 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A2P43004 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC1A2P43004 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC1A2P43004 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC1A2P43004 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A2P43004 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A2P43004 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A2P43004 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A2P43004 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A2P43004 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A2P43004 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A2P43004 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A2P43004 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.73■□□□□ 0.59
SLC1A2P43004 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC1A2P43004 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SLC1A2P43004 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SLC1A2P43004 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A2P43004 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A2P43004 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A2P43004 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A2P43004 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A2P43004 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A2P43004 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
SLC1A2P43004 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A2P43004 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A2P43004 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A2P43004 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC1A2P43004 AP000692.2-201ENST00000608391 879 ntBASIC18.72■□□□□ 0.59
SLC1A2P43004 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A2P43004 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A2P43004 RCC2P3-201ENST00000418112 1537 ntBASIC18.72■□□□□ 0.59
SLC1A2P43004 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A2P43004 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A2P43004 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
SLC1A2P43004 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A2P43004 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SLC1A2P43004 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A2P43004 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A2P43004 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SLC1A2P43004 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SLC1A2P43004 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC1A2P43004 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC1A2P43004 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC1A2P43004 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC1A2P43004 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SLC1A2P43004 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A2P43004 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A2P43004 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A2P43004 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC1A2P43004 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC1A2P43004 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC1A2P43004 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
SLC1A2P43004 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC1A2P43004 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A2P43004 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A2P43004 RPS2P55-201ENST00000397318 883 ntBASIC18.71■□□□□ 0.59
SLC1A2P43004 UBE2SP1-201ENST00000450587 669 ntBASIC18.71■□□□□ 0.59
SLC1A2P43004 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A2P43004 AC107956.1-201ENST00000494359 873 ntBASIC18.71■□□□□ 0.59
SLC1A2P43004 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC1A2P43004 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.71■□□□□ 0.59
SLC1A2P43004 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC1A2P43004 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.71■□□□□ 0.59
SLC1A2P43004 AC073592.3-201ENST00000625118 1834 ntBASIC18.71■□□□□ 0.59
SLC1A2P43004 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A2P43004 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A2P43004 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC1A2P43004 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.71■□□□□ 0.58
SLC1A2P43004 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A2P43004 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A2P43004 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A2P43004 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SLC1A2P43004 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SLC1A2P43004 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A2P43004 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A2P43004 AL357033.4-201ENST00000617703 1807 ntBASIC18.7■□□□□ 0.58
SLC1A2P43004 BICD1-207ENST00000551848 1962 ntBASIC18.7■□□□□ 0.58
SLC1A2P43004 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A2P43004 ABHD17AP1-201ENST00000358206 933 ntBASIC18.7■□□□□ 0.58
SLC1A2P43004 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A2P43004 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A2P43004 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A2P43004 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC1A2P43004 NUDT16P1-203ENST00000513809 620 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms