Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PRPHP41219 AL353719.1-201ENST00000566847 864 ntBASIC21.21■□□□□ 0.99
PRPHP41219 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRPHP41219 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.21■□□□□ 0.99
PRPHP41219 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRPHP41219 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRPHP41219 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRPHP41219 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.21■□□□□ 0.99
PRPHP41219 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.21■□□□□ 0.99
PRPHP41219 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRPHP41219 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 AL357033.4-201ENST00000617703 1807 ntBASIC21.2■□□□□ 0.98
PRPHP41219 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.2■□□□□ 0.98
PRPHP41219 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PRPHP41219 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.2■□□□□ 0.98
PRPHP41219 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.2■□□□□ 0.98
PRPHP41219 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.2■□□□□ 0.98
PRPHP41219 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.2■□□□□ 0.98
PRPHP41219 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PRPHP41219 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
PRPHP41219 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PRPHP41219 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 AC092338.2-201ENST00000568827 1415 ntBASIC21.2■□□□□ 0.98
PRPHP41219 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPHP41219 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
PRPHP41219 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPHP41219 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPHP41219 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PRPHP41219 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPHP41219 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRPHP41219 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPHP41219 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PRPHP41219 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPHP41219 TSPY14P-201ENST00000303979 915 ntBASIC21.19■□□□□ 0.98
PRPHP41219 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.19■□□□□ 0.98
PRPHP41219 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.19■□□□□ 0.98
PRPHP41219 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
PRPHP41219 MCCD1P1-208ENST00000445732 328 ntBASIC21.19■□□□□ 0.98
PRPHP41219 C2orf69P3-201ENST00000565542 1120 ntBASIC21.19■□□□□ 0.98
PRPHP41219 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.19■□□□□ 0.98
PRPHP41219 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPHP41219 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.19■□□□□ 0.98
PRPHP41219 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPHP41219 AC008556.1-201ENST00000610908 2040 ntBASIC21.19■□□□□ 0.98
PRPHP41219 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PRPHP41219 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRPHP41219 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPHP41219 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPHP41219 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.18■□□□□ 0.98
PRPHP41219 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPHP41219 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
PRPHP41219 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.18■□□□□ 0.98
PRPHP41219 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.18■□□□□ 0.98
PRPHP41219 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.18■□□□□ 0.98
PRPHP41219 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PRPHP41219 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPHP41219 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.18■□□□□ 0.98
PRPHP41219 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.18■□□□□ 0.98
PRPHP41219 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.18■□□□□ 0.98
PRPHP41219 CCR12P-201ENST00000446203 998 ntBASIC21.18■□□□□ 0.98
PRPHP41219 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.18■□□□□ 0.98
PRPHP41219 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPHP41219 MIR4674-201ENST00000582457 87 ntBASIC21.18■□□□□ 0.98
PRPHP41219 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPHP41219 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.18■□□□□ 0.98
PRPHP41219 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPHP41219 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPHP41219 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPHP41219 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPHP41219 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPHP41219 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPHP41219 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPHP41219 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPHP41219 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPHP41219 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPHP41219 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.17■□□□□ 0.98
PRPHP41219 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPHP41219 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.17■□□□□ 0.98
PRPHP41219 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PRPHP41219 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPHP41219 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.17■□□□□ 0.98
PRPHP41219 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.17■□□□□ 0.98
PRPHP41219 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PRPHP41219 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.17■□□□□ 0.98
PRPHP41219 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.17■□□□□ 0.98
PRPHP41219 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPHP41219 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.17■□□□□ 0.98
PRPHP41219 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.17■□□□□ 0.98
PRPHP41219 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.17■□□□□ 0.98
PRPHP41219 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms