Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC13P31276 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC13P31276 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXC13P31276 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXC13P31276 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXC13P31276 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXC13P31276 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HOXC13P31276 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC13P31276 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC13P31276 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC13P31276 KRT8P32-201ENST00000512863 1461 ntBASIC19.46■□□□□ 0.71
HOXC13P31276 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC13P31276 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HOXC13P31276 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
HOXC13P31276 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXC13P31276 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC13P31276 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXC13P31276 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXC13P31276 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXC13P31276 HOMER2P1-201ENST00000455653 964 ntBASIC19.45■□□□□ 0.7
HOXC13P31276 AC008622.2-201ENST00000617006 1229 ntBASIC19.45■□□□□ 0.7
HOXC13P31276 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXC13P31276 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXC13P31276 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXC13P31276 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXC13P31276 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HOXC13P31276 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC13P31276 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
HOXC13P31276 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 AL512353.2-201ENST00000448759 1962 ntBASIC19.44■□□□□ 0.7
HOXC13P31276 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HOXC13P31276 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXC13P31276 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXC13P31276 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HOXC13P31276 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HOXC13P31276 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXC13P31276 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXC13P31276 AC112907.2-201ENST00000448639 330 ntBASIC19.44■□□□□ 0.7
HOXC13P31276 VENTXP5-201ENST00000523979 775 ntBASIC19.44■□□□□ 0.7
HOXC13P31276 AC068587.9-201ENST00000641814 219 ntBASIC19.44■□□□□ 0.7
HOXC13P31276 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HOXC13P31276 AP000974.1-201ENST00000623909 2387 ntBASIC19.44■□□□□ 0.7
HOXC13P31276 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC13P31276 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC13P31276 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HOXC13P31276 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 SPDYE13P-201ENST00000445314 798 ntBASIC19.43■□□□□ 0.7
HOXC13P31276 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXC13P31276 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXC13P31276 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXC13P31276 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXC13P31276 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HOXC13P31276 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC13P31276 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HOXC13P31276 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HOXC13P31276 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
HOXC13P31276 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HOXC13P31276 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC13P31276 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms