Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB4AP20338 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB4AP20338 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB4AP20338 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RAB4AP20338 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB4AP20338 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB4AP20338 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB4AP20338 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB4AP20338 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB4AP20338 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB4AP20338 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
RAB4AP20338 KRT87P-202ENST00000534226 1464 ntBASIC14.38□□□□□ -0.11
RAB4AP20338 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB4AP20338 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
RAB4AP20338 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RAB4AP20338 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB4AP20338 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
RAB4AP20338 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 AC099791.1-201ENST00000416440 715 ntBASIC14.37□□□□□ -0.11
RAB4AP20338 AC007322.3-201ENST00000426526 701 ntBASIC14.37□□□□□ -0.11
RAB4AP20338 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB4AP20338 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.37□□□□□ -0.11
RAB4AP20338 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB4AP20338 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB4AP20338 AC131281.2-201ENST00000520478 145 ntBASIC14.37□□□□□ -0.11
RAB4AP20338 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB4AP20338 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB4AP20338 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB4AP20338 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB4AP20338 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 FLJ38576-201ENST00000623820 2459 ntBASIC14.37□□□□□ -0.11
RAB4AP20338 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB4AP20338 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB4AP20338 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB4AP20338 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB4AP20338 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
RAB4AP20338 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB4AP20338 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB4AP20338 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB4AP20338 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB4AP20338 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 AC024257.2-201ENST00000549699 147 ntBASIC14.36□□□□□ -0.11
RAB4AP20338 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
RAB4AP20338 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB4AP20338 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms