Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT4P19013 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
KRT4P19013 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT4P19013 RARRES2P6-201ENST00000567333 442 ntBASIC18.87■□□□□ 0.61
KRT4P19013 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
KRT4P19013 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.87■□□□□ 0.61
KRT4P19013 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 AC092118.2-201ENST00000613495 667 ntBASIC18.87■□□□□ 0.61
KRT4P19013 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
KRT4P19013 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT4P19013 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT4P19013 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
KRT4P19013 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT4P19013 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT4P19013 HEIH-201ENST00000623091 1652 ntBASIC18.86■□□□□ 0.61
KRT4P19013 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT4P19013 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT4P19013 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT4P19013 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT4P19013 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
KRT4P19013 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT4P19013 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT4P19013 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT4P19013 AC120498.8-201ENST00000614275 531 ntBASIC18.86■□□□□ 0.61
KRT4P19013 HLA-B-256ENST00000639848 1089 ntBASIC18.86■□□□□ 0.61
KRT4P19013 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT4P19013 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT4P19013 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT4P19013 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT4P19013 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT4P19013 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT4P19013 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
KRT4P19013 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
KRT4P19013 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
KRT4P19013 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
KRT4P19013 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT4P19013 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
KRT4P19013 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
KRT4P19013 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT4P19013 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.85■□□□□ 0.61
KRT4P19013 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.85■□□□□ 0.61
KRT4P19013 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT4P19013 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT4P19013 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
KRT4P19013 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.85■□□□□ 0.61
KRT4P19013 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
KRT4P19013 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
KRT4P19013 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT4P19013 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT4P19013 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
KRT4P19013 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
KRT4P19013 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT4P19013 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
KRT4P19013 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.84■□□□□ 0.61
KRT4P19013 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT4P19013 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KRT4P19013 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT4P19013 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT4P19013 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT4P19013 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KRT4P19013 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT4P19013 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT4P19013 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
KRT4P19013 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms