Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.51■□□□□ 0.23
ATF1P18846 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.51■□□□□ 0.23
ATF1P18846 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.51■□□□□ 0.23
ATF1P18846 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.51■□□□□ 0.23
ATF1P18846 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.51■□□□□ 0.23
ATF1P18846 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.51■□□□□ 0.23
ATF1P18846 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ATF1P18846 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.51■□□□□ 0.23
ATF1P18846 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.51■□□□□ 0.23
ATF1P18846 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.51■□□□□ 0.23
ATF1P18846 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ATF1P18846 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATF1P18846 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATF1P18846 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.51■□□□□ 0.23
ATF1P18846 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
ATF1P18846 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
ATF1P18846 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ATF1P18846 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.51■□□□□ 0.23
ATF1P18846 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
ATF1P18846 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.5■□□□□ 0.23
ATF1P18846 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
ATF1P18846 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.5■□□□□ 0.23
ATF1P18846 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.5■□□□□ 0.23
ATF1P18846 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.5■□□□□ 0.23
ATF1P18846 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ATF1P18846 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.5■□□□□ 0.23
ATF1P18846 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATF1P18846 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.5■□□□□ 0.23
ATF1P18846 UNC93B4-201ENST00000505679 747 ntBASIC16.5■□□□□ 0.23
ATF1P18846 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.5■□□□□ 0.23
ATF1P18846 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ATF1P18846 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 AC090340.1-201ENST00000620778 4980 ntBASIC16.5■□□□□ 0.23
ATF1P18846 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.5■□□□□ 0.23
ATF1P18846 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF1P18846 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.5■□□□□ 0.23
ATF1P18846 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.49■□□□□ 0.23
ATF1P18846 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATF1P18846 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ATF1P18846 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.49■□□□□ 0.23
ATF1P18846 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.49■□□□□ 0.23
ATF1P18846 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 ESPNP-201ENST00000270691 2015 ntBASIC16.49■□□□□ 0.23
ATF1P18846 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.49■□□□□ 0.23
ATF1P18846 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ATF1P18846 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.49■□□□□ 0.23
ATF1P18846 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.49■□□□□ 0.23
ATF1P18846 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.49■□□□□ 0.23
ATF1P18846 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.49■□□□□ 0.23
ATF1P18846 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ATF1P18846 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ATF1P18846 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF1P18846 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ATF1P18846 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ATF1P18846 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms