Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.6■□□□□ 0.41
TPRP12270 AC012640.2-201ENST00000561606 901 ntBASIC17.6■□□□□ 0.41
TPRP12270 MIR5100-201ENST00000579544 119 ntBASIC17.6■□□□□ 0.41
TPRP12270 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPRP12270 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TPRP12270 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TPRP12270 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.6■□□□□ 0.41
TPRP12270 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPRP12270 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPRP12270 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TPRP12270 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPRP12270 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPRP12270 GAPDHP21-201ENST00000450301 1010 ntBASIC17.6■□□□□ 0.41
TPRP12270 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.6■□□□□ 0.41
TPRP12270 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TPRP12270 YBX1P5-201ENST00000509441 847 ntBASIC17.6■□□□□ 0.41
TPRP12270 AL359881.2-201ENST00000602973 570 ntBASIC17.6■□□□□ 0.41
TPRP12270 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
TPRP12270 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPRP12270 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.6■□□□□ 0.41
TPRP12270 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPRP12270 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.59■□□□□ 0.41
TPRP12270 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TPRP12270 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TPRP12270 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TPRP12270 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.59■□□□□ 0.41
TPRP12270 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.59■□□□□ 0.41
TPRP12270 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TPRP12270 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.59■□□□□ 0.41
TPRP12270 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.59■□□□□ 0.41
TPRP12270 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TPRP12270 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.59■□□□□ 0.41
TPRP12270 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TPRP12270 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPRP12270 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TPRP12270 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPRP12270 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TPRP12270 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPRP12270 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TPRP12270 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPRP12270 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TPRP12270 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPRP12270 AC007967.2-201ENST00000432613 625 ntBASIC17.59■□□□□ 0.41
TPRP12270 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.59■□□□□ 0.41
TPRP12270 AC096582.2-201ENST00000510860 516 ntBASIC17.59■□□□□ 0.41
TPRP12270 AC011840.4-201ENST00000578471 627 ntBASIC17.59■□□□□ 0.41
TPRP12270 AP001269.4-201ENST00000609611 512 ntBASIC17.59■□□□□ 0.41
TPRP12270 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TPRP12270 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.59■□□□□ 0.41
TPRP12270 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TPRP12270 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TPRP12270 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPRP12270 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TPRP12270 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TPRP12270 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
TPRP12270 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TPRP12270 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.58■□□□□ 0.41
TPRP12270 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TPRP12270 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.58■□□□□ 0.41
TPRP12270 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TPRP12270 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TPRP12270 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.58■□□□□ 0.41
TPRP12270 AC005829.1-201ENST00000570002 483 ntBASIC17.58■□□□□ 0.41
TPRP12270 MIR4469-201ENST00000583919 79 ntBASIC17.58■□□□□ 0.41
TPRP12270 AL606495.2-201ENST00000605867 535 ntBASIC17.58■□□□□ 0.41
TPRP12270 AC124864.1-201ENST00000623408 392 ntBASIC17.58■□□□□ 0.41
TPRP12270 Z92544.3-201ENST00000624747 417 ntBASIC17.58■□□□□ 0.41
TPRP12270 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TPRP12270 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPRP12270 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPRP12270 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.58■□□□□ 0.4
TPRP12270 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPRP12270 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPRP12270 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPRP12270 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPRP12270 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPRP12270 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.58■□□□□ 0.4
TPRP12270 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TPRP12270 IGHGP-201ENST00000390555 1178 ntBASIC17.58■□□□□ 0.4
TPRP12270 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.58■□□□□ 0.4
TPRP12270 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.58■□□□□ 0.4
TPRP12270 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPRP12270 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPRP12270 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TPRP12270 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPRP12270 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPRP12270 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPRP12270 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPRP12270 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPRP12270 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPRP12270 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPRP12270 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.57■□□□□ 0.4
TPRP12270 AC002310.6-201ENST00000624451 1377 ntBASIC17.57■□□□□ 0.4
TPRP12270 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.57■□□□□ 0.4
TPRP12270 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPRP12270 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.57■□□□□ 0.4
TPRP12270 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.57■□□□□ 0.4
TPRP12270 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.57■□□□□ 0.4
TPRP12270 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPRP12270 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms