Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
TOP2AP11388 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC32.87■■■□□ 2.85
TOP2AP11388 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
TOP2AP11388 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC32.87■■■□□ 2.85
TOP2AP11388 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC32.87■■■□□ 2.85
TOP2AP11388 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
TOP2AP11388 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
TOP2AP11388 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
TOP2AP11388 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
TOP2AP11388 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
TOP2AP11388 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC32.87■■■□□ 2.85
TOP2AP11388 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
TOP2AP11388 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
TOP2AP11388 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
TOP2AP11388 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
TOP2AP11388 MIR7706-201ENST00000613747 67 ntBASIC32.87■■■□□ 2.85
TOP2AP11388 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
TOP2AP11388 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
TOP2AP11388 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
TOP2AP11388 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
TOP2AP11388 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
TOP2AP11388 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
TOP2AP11388 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC32.86■■■□□ 2.85
TOP2AP11388 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC32.86■■■□□ 2.85
TOP2AP11388 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
TOP2AP11388 Z98044.1-201ENST00000632503 1764 ntBASIC32.86■■■□□ 2.85
TOP2AP11388 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
TOP2AP11388 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC32.85■■■□□ 2.85
TOP2AP11388 MTMR9LP-203ENST00000426597 1545 ntBASIC32.85■■■□□ 2.85
TOP2AP11388 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC32.85■■■□□ 2.85
TOP2AP11388 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC32.85■■■□□ 2.85
TOP2AP11388 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
TOP2AP11388 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
TOP2AP11388 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC32.85■■■□□ 2.85
TOP2AP11388 BX640515.1-201ENST00000617215 977 ntBASIC32.85■■■□□ 2.85
TOP2AP11388 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC32.85■■■□□ 2.85
TOP2AP11388 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
TOP2AP11388 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
TOP2AP11388 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
TOP2AP11388 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
TOP2AP11388 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
TOP2AP11388 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
TOP2AP11388 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
TOP2AP11388 REEP1-209ENST00000541910 969 ntTSL 2 BASIC32.84■■■□□ 2.85
TOP2AP11388 TPM1-218ENST00000559281 851 ntTSL 5 BASIC32.84■■■□□ 2.85
TOP2AP11388 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
TOP2AP11388 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TOP2AP11388 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TOP2AP11388 VENTXP7-201ENST00000475503 772 ntBASIC32.83■■■□□ 2.85
TOP2AP11388 KRT18P41-201ENST00000518924 1277 ntBASIC32.83■■■□□ 2.85
TOP2AP11388 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TOP2AP11388 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC32.83■■■□□ 2.85
TOP2AP11388 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC32.83■■■□□ 2.85
TOP2AP11388 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TOP2AP11388 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC32.83■■■□□ 2.85
TOP2AP11388 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC32.83■■■□□ 2.85
TOP2AP11388 AC124864.1-201ENST00000623408 392 ntBASIC32.83■■■□□ 2.85
TOP2AP11388 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TOP2AP11388 AL157384.1-201ENST00000445995 2473 ntBASIC32.83■■■□□ 2.85
TOP2AP11388 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
TOP2AP11388 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TOP2AP11388 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
TOP2AP11388 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC32.82■■■□□ 2.85
TOP2AP11388 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC32.82■■■□□ 2.85
TOP2AP11388 AL353692.3-201ENST00000407031 1396 ntBASIC32.82■■■□□ 2.85
TOP2AP11388 DFFB-203ENST00000341385 572 ntTSL 5 BASIC32.82■■■□□ 2.85
TOP2AP11388 TEX30-205ENST00000376029 959 ntTSL 2 BASIC32.82■■■□□ 2.85
TOP2AP11388 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC32.82■■■□□ 2.85
TOP2AP11388 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.85
TOP2AP11388 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC32.82■■■□□ 2.85
TOP2AP11388 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC32.82■■■□□ 2.85
TOP2AP11388 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC32.82■■■□□ 2.85
TOP2AP11388 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC32.82■■■□□ 2.84
TOP2AP11388 FP475955.4-201ENST00000623131 1990 ntBASIC32.82■■■□□ 2.84
TOP2AP11388 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.84
TOP2AP11388 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC32.82■■■□□ 2.84
TOP2AP11388 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC32.82■■■□□ 2.84
TOP2AP11388 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC32.82■■■□□ 2.84
TOP2AP11388 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
TOP2AP11388 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC32.82■■■□□ 2.84
TOP2AP11388 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
TOP2AP11388 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
TOP2AP11388 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
TOP2AP11388 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
TOP2AP11388 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC32.82■■■□□ 2.84
TOP2AP11388 ABR-217ENST00000572441 563 ntTSL 4 BASIC32.82■■■□□ 2.84
TOP2AP11388 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC32.82■■■□□ 2.84
TOP2AP11388 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC32.82■■■□□ 2.84
TOP2AP11388 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC32.82■■■□□ 2.84
TOP2AP11388 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC32.81■■■□□ 2.84
TOP2AP11388 AC141586.3-201ENST00000562166 1838 ntBASIC32.81■■■□□ 2.84
TOP2AP11388 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
TOP2AP11388 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
TOP2AP11388 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
TOP2AP11388 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
TOP2AP11388 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC32.81■■■□□ 2.84
TOP2AP11388 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC32.81■■■□□ 2.84
TOP2AP11388 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC32.81■■■□□ 2.84
TOP2AP11388 IGHV3-41-201ENST00000613121 348 ntBASIC32.81■■■□□ 2.84
TOP2AP11388 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC32.8■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms