Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.69□□□□□ -0.06
CD28P10747 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.69□□□□□ -0.06
CD28P10747 AL136038.3-201ENST00000561909 1096 ntBASIC14.69□□□□□ -0.06
CD28P10747 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CD28P10747 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
CD28P10747 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.69□□□□□ -0.06
CD28P10747 HYMAI.1-201ENST00000620949 238 ntBASIC14.69□□□□□ -0.06
CD28P10747 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
CD28P10747 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CD28P10747 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.69□□□□□ -0.06
CD28P10747 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.69□□□□□ -0.06
CD28P10747 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.69□□□□□ -0.06
CD28P10747 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.69□□□□□ -0.06
CD28P10747 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.69□□□□□ -0.06
CD28P10747 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CD28P10747 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CD28P10747 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.69□□□□□ -0.06
CD28P10747 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD28P10747 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CD28P10747 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CD28P10747 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.68□□□□□ -0.06
CD28P10747 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.68□□□□□ -0.06
CD28P10747 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.68□□□□□ -0.06
CD28P10747 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.68□□□□□ -0.06
CD28P10747 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.68□□□□□ -0.06
CD28P10747 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.68□□□□□ -0.06
CD28P10747 AC069148.1-201ENST00000608741 768 ntBASIC14.68□□□□□ -0.06
CD28P10747 AC024243.1-201ENST00000609234 778 ntBASIC14.68□□□□□ -0.06
CD28P10747 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CD28P10747 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CD28P10747 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.68□□□□□ -0.06
CD28P10747 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CD28P10747 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.68□□□□□ -0.06
CD28P10747 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CD28P10747 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.68□□□□□ -0.06
CD28P10747 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD28P10747 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.68□□□□□ -0.06
CD28P10747 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CD28P10747 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.67□□□□□ -0.06
CD28P10747 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.67□□□□□ -0.06
CD28P10747 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CD28P10747 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD28P10747 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD28P10747 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD28P10747 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD28P10747 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD28P10747 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.67□□□□□ -0.06
CD28P10747 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD28P10747 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CD28P10747 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD28P10747 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CD28P10747 MCCD1P1-208ENST00000445732 328 ntBASIC14.67□□□□□ -0.06
CD28P10747 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.67□□□□□ -0.06
CD28P10747 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.67□□□□□ -0.06
CD28P10747 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.67□□□□□ -0.06
CD28P10747 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.67□□□□□ -0.06
CD28P10747 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
CD28P10747 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.67□□□□□ -0.06
CD28P10747 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.67□□□□□ -0.06
CD28P10747 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD28P10747 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.67□□□□□ -0.06
CD28P10747 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD28P10747 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CD28P10747 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.67□□□□□ -0.06
CD28P10747 Z82202.1-201ENST00000623446 1880 ntBASIC14.67□□□□□ -0.06
CD28P10747 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD28P10747 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD28P10747 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD28P10747 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD28P10747 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD28P10747 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD28P10747 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD28P10747 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.66□□□□□ -0.06
CD28P10747 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms