Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.82■■□□□ 1.08
CALM3P0DP25 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CALM3P0DP25 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CALM3P0DP25 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.82■■□□□ 1.08
CALM3P0DP25 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CALM3P0DP25 AL031598.1-201ENST00000561511 1773 ntBASIC21.82■■□□□ 1.08
CALM3P0DP25 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CALM3P0DP25 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CALM3P0DP25 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.81■■□□□ 1.08
CALM3P0DP25 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CALM3P0DP25 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALM3P0DP25 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.81■■□□□ 1.08
CALM3P0DP25 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.81■■□□□ 1.08
CALM3P0DP25 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.81■■□□□ 1.08
CALM3P0DP25 ECEL1P3-201ENST00000427961 737 ntBASIC21.81■■□□□ 1.08
CALM3P0DP25 LIN28AP1-201ENST00000429574 405 ntBASIC21.81■■□□□ 1.08
CALM3P0DP25 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.81■■□□□ 1.08
CALM3P0DP25 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.81■■□□□ 1.08
CALM3P0DP25 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CALM3P0DP25 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALM3P0DP25 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALM3P0DP25 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CALM3P0DP25 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.8■■□□□ 1.08
CALM3P0DP25 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALM3P0DP25 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.8■■□□□ 1.08
CALM3P0DP25 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALM3P0DP25 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALM3P0DP25 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CALM3P0DP25 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALM3P0DP25 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CALM3P0DP25 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALM3P0DP25 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALM3P0DP25 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
CALM3P0DP25 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.8■■□□□ 1.08
CALM3P0DP25 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CALM3P0DP25 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALM3P0DP25 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CALM3P0DP25 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CALM3P0DP25 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.8■■□□□ 1.08
CALM3P0DP25 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CALM3P0DP25 AC120498.9-201ENST00000339021 3867 ntBASIC21.8■■□□□ 1.08
CALM3P0DP25 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALM3P0DP25 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CALM3P0DP25 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CALM3P0DP25 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALM3P0DP25 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALM3P0DP25 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALM3P0DP25 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.79■■□□□ 1.08
CALM3P0DP25 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.79■■□□□ 1.08
CALM3P0DP25 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.79■■□□□ 1.08
CALM3P0DP25 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.79■■□□□ 1.08
CALM3P0DP25 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.79■■□□□ 1.08
CALM3P0DP25 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CALM3P0DP25 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.79■■□□□ 1.08
CALM3P0DP25 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CALM3P0DP25 AC034236.2-201ENST00000606662 1610 ntBASIC21.79■■□□□ 1.08
CALM3P0DP25 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CALM3P0DP25 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.79■■□□□ 1.08
CALM3P0DP25 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CALM3P0DP25 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.79■■□□□ 1.08
CALM3P0DP25 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.79■■□□□ 1.08
CALM3P0DP25 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALM3P0DP25 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CALM3P0DP25 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.78■■□□□ 1.08
CALM3P0DP25 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 AL137013.1-201ENST00000432946 1228 ntBASIC21.78■■□□□ 1.08
CALM3P0DP25 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
CALM3P0DP25 NEK4P2-201ENST00000580004 1012 ntBASIC21.78■■□□□ 1.08
CALM3P0DP25 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.78■■□□□ 1.08
CALM3P0DP25 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.78■■□□□ 1.08
CALM3P0DP25 AL138966.2-201ENST00000621997 464 ntBASIC21.78■■□□□ 1.08
CALM3P0DP25 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 KRT8P7-201ENST00000533003 1432 ntBASIC21.78■■□□□ 1.08
CALM3P0DP25 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CALM3P0DP25 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CALM3P0DP25 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CALM3P0DP25 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CALM3P0DP25 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CALM3P0DP25 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CALM3P0DP25 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CALM3P0DP25 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CALM3P0DP25 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CALM3P0DP25 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CALM3P0DP25 TERF1P1-201ENST00000311003 1181 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms