Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 ANO7L1-203ENST00000602586 1720 ntBASIC20.32■□□□□ 0.84
CCDC172P0C7W6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.31■□□□□ 0.84
CCDC172P0C7W6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 POU5F1P3-201ENST00000428824 1078 ntBASIC20.31■□□□□ 0.84
CCDC172P0C7W6 KSR1P1-201ENST00000446298 240 ntBASIC20.31■□□□□ 0.84
CCDC172P0C7W6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 AC006058.3-201ENST00000606217 1069 ntBASIC20.31■□□□□ 0.84
CCDC172P0C7W6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 AC073648.6-201ENST00000641589 218 ntBASIC20.31■□□□□ 0.84
CCDC172P0C7W6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC172P0C7W6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC172P0C7W6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC172P0C7W6 HTR7P1-201ENST00000538670 1336 ntBASIC20.28■□□□□ 0.84
CCDC172P0C7W6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCDC172P0C7W6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC172P0C7W6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC172P0C7W6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC172P0C7W6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC172P0C7W6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC172P0C7W6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC172P0C7W6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC172P0C7W6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC172P0C7W6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms