Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
RAB40ALP0C0E4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB40ALP0C0E4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 SPDYE15P-201ENST00000424157 909 ntBASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40ALP0C0E4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 RASA4DP-201ENST00000460726 1199 ntBASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40ALP0C0E4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 KRT18P56-201ENST00000507275 550 ntBASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 AC069148.1-201ENST00000608741 768 ntBASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms