Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.3■□□□□ 0.36
THBS1P07996 MESTP1-201ENST00000404287 994 ntBASIC17.3■□□□□ 0.36
THBS1P07996 FAM197Y1-201ENST00000421178 764 ntBASIC17.3■□□□□ 0.36
THBS1P07996 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.3■□□□□ 0.36
THBS1P07996 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.3■□□□□ 0.36
THBS1P07996 CD177P1-201ENST00000606252 935 ntBASIC17.3■□□□□ 0.36
THBS1P07996 DGCR10-201ENST00000609839 495 ntBASIC17.3■□□□□ 0.36
THBS1P07996 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.3■□□□□ 0.36
THBS1P07996 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
THBS1P07996 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.3■□□□□ 0.36
THBS1P07996 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 AC135050.7-201ENST00000624508 2218 ntBASIC17.29■□□□□ 0.36
THBS1P07996 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.29■□□□□ 0.36
THBS1P07996 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
THBS1P07996 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.29■□□□□ 0.36
THBS1P07996 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
THBS1P07996 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.29■□□□□ 0.36
THBS1P07996 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
THBS1P07996 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
THBS1P07996 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.29■□□□□ 0.36
THBS1P07996 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
THBS1P07996 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS1P07996 AC096733.2-201ENST00000609937 1394 ntBASIC17.28■□□□□ 0.36
THBS1P07996 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
THBS1P07996 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
THBS1P07996 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
THBS1P07996 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.28■□□□□ 0.36
THBS1P07996 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.28■□□□□ 0.36
THBS1P07996 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.28■□□□□ 0.36
THBS1P07996 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.28■□□□□ 0.36
THBS1P07996 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
THBS1P07996 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.28■□□□□ 0.36
THBS1P07996 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.28■□□□□ 0.36
THBS1P07996 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS1P07996 BICD1-207ENST00000551848 1962 ntBASIC17.28■□□□□ 0.36
THBS1P07996 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
THBS1P07996 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.28■□□□□ 0.36
THBS1P07996 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
THBS1P07996 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.27■□□□□ 0.36
THBS1P07996 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 RCC2P3-201ENST00000418112 1537 ntBASIC17.27■□□□□ 0.36
THBS1P07996 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.27■□□□□ 0.36
THBS1P07996 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
THBS1P07996 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
THBS1P07996 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
THBS1P07996 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
THBS1P07996 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.27■□□□□ 0.36
THBS1P07996 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
THBS1P07996 AC012618.2-201ENST00000428058 849 ntBASIC17.27■□□□□ 0.36
THBS1P07996 AC116562.2-201ENST00000507042 360 ntBASIC17.27■□□□□ 0.36
THBS1P07996 NUDT16P1-203ENST00000513809 620 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms