Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.07■□□□□ 0.96
TPM3P06753 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.07■□□□□ 0.96
TPM3P06753 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.07■□□□□ 0.96
TPM3P06753 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.07■□□□□ 0.96
TPM3P06753 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.07■□□□□ 0.96
TPM3P06753 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TPM3P06753 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.07■□□□□ 0.96
TPM3P06753 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.07■□□□□ 0.96
TPM3P06753 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TPM3P06753 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.06■□□□□ 0.96
TPM3P06753 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
TPM3P06753 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.06■□□□□ 0.96
TPM3P06753 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 SLC25A6P5-201ENST00000435663 894 ntBASIC21.06■□□□□ 0.96
TPM3P06753 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.06■□□□□ 0.96
TPM3P06753 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.06■□□□□ 0.96
TPM3P06753 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.06■□□□□ 0.96
TPM3P06753 AL121906.2-201ENST00000621597 723 ntBASIC21.06■□□□□ 0.96
TPM3P06753 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.06■□□□□ 0.96
TPM3P06753 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
TPM3P06753 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TPM3P06753 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TPM3P06753 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM3P06753 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TPM3P06753 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TPM3P06753 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.05■□□□□ 0.96
TPM3P06753 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
TPM3P06753 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TPM3P06753 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TPM3P06753 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.05■□□□□ 0.96
TPM3P06753 AC126763.1-201ENST00000552015 2118 ntBASIC21.05■□□□□ 0.96
TPM3P06753 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM3P06753 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
TPM3P06753 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TPM3P06753 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TPM3P06753 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TPM3P06753 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TPM3P06753 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM3P06753 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TPM3P06753 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
TPM3P06753 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TPM3P06753 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM3P06753 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM3P06753 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.04■□□□□ 0.96
TPM3P06753 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.04■□□□□ 0.96
TPM3P06753 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.04■□□□□ 0.96
TPM3P06753 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.04■□□□□ 0.96
TPM3P06753 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.04■□□□□ 0.96
TPM3P06753 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
TPM3P06753 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM3P06753 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TPM3P06753 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM3P06753 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TPM3P06753 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TPM3P06753 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM3P06753 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM3P06753 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TPM3P06753 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TPM3P06753 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TPM3P06753 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TPM3P06753 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TPM3P06753 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.03■□□□□ 0.96
TPM3P06753 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TPM3P06753 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM3P06753 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM3P06753 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TPM3P06753 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms