Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCCBP05166 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCCBP05166 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.61■□□□□ 0.57
PCCBP05166 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.61■□□□□ 0.57
PCCBP05166 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCCBP05166 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCCBP05166 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCCBP05166 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCCBP05166 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.61■□□□□ 0.57
PCCBP05166 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCCBP05166 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.61■□□□□ 0.57
PCCBP05166 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.61■□□□□ 0.57
PCCBP05166 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.61■□□□□ 0.57
PCCBP05166 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.61■□□□□ 0.57
PCCBP05166 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.61■□□□□ 0.57
PCCBP05166 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.61■□□□□ 0.57
PCCBP05166 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.61■□□□□ 0.57
PCCBP05166 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.61■□□□□ 0.57
PCCBP05166 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.61■□□□□ 0.57
PCCBP05166 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCCBP05166 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.6■□□□□ 0.57
PCCBP05166 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCCBP05166 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.6■□□□□ 0.57
PCCBP05166 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.6■□□□□ 0.57
PCCBP05166 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCCBP05166 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.6■□□□□ 0.57
PCCBP05166 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.6■□□□□ 0.57
PCCBP05166 MYC-208ENST00000641036 567 ntBASIC18.6■□□□□ 0.57
PCCBP05166 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.6■□□□□ 0.57
PCCBP05166 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.6■□□□□ 0.57
PCCBP05166 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCCBP05166 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCCBP05166 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCCBP05166 AL109659.2-201ENST00000606809 1674 ntBASIC18.6■□□□□ 0.57
PCCBP05166 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCCBP05166 AL161938.1-201ENST00000569833 2180 ntBASIC18.59■□□□□ 0.57
PCCBP05166 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCCBP05166 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.59■□□□□ 0.57
PCCBP05166 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 AC120498.9-201ENST00000339021 3867 ntBASIC18.59■□□□□ 0.57
PCCBP05166 KRT8P32-201ENST00000512863 1461 ntBASIC18.59■□□□□ 0.57
PCCBP05166 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.59■□□□□ 0.57
PCCBP05166 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.59■□□□□ 0.57
PCCBP05166 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 AL031133.1-201ENST00000406807 723 ntBASIC18.59■□□□□ 0.57
PCCBP05166 SPDYE15P-201ENST00000424157 909 ntBASIC18.59■□□□□ 0.57
PCCBP05166 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.59■□□□□ 0.57
PCCBP05166 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.59■□□□□ 0.57
PCCBP05166 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.59■□□□□ 0.57
PCCBP05166 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.59■□□□□ 0.57
PCCBP05166 AL671277.2-201ENST00000458060 996 ntBASIC18.59■□□□□ 0.57
PCCBP05166 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.59■□□□□ 0.57
PCCBP05166 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.59■□□□□ 0.57
PCCBP05166 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCCBP05166 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCCBP05166 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCCBP05166 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PCCBP05166 AL049812.1-201ENST00000432563 2267 ntBASIC18.58■□□□□ 0.57
PCCBP05166 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
PCCBP05166 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCCBP05166 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCCBP05166 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCCBP05166 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCCBP05166 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCCBP05166 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCCBP05166 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.58■□□□□ 0.56
PCCBP05166 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.58■□□□□ 0.56
PCCBP05166 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.58■□□□□ 0.56
PCCBP05166 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.58■□□□□ 0.56
PCCBP05166 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCCBP05166 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCCBP05166 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCCBP05166 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.58■□□□□ 0.56
PCCBP05166 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCCBP05166 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms