Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHGBP05060 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.57■■□□□ 1.2
CHGBP05060 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.57■■□□□ 1.2
CHGBP05060 MIR3180-5-201ENST00000583743 153 ntBASIC22.57■■□□□ 1.2
CHGBP05060 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.57■■□□□ 1.2
CHGBP05060 AC083906.6-201ENST00000641366 219 ntBASIC22.57■■□□□ 1.2
CHGBP05060 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHGBP05060 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.57■■□□□ 1.2
CHGBP05060 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.57■■□□□ 1.2
CHGBP05060 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHGBP05060 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHGBP05060 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHGBP05060 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CHGBP05060 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHGBP05060 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHGBP05060 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHGBP05060 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHGBP05060 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.57■■□□□ 1.2
CHGBP05060 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.56■■□□□ 1.2
CHGBP05060 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHGBP05060 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHGBP05060 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CHGBP05060 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHGBP05060 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.56■■□□□ 1.2
CHGBP05060 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHGBP05060 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHGBP05060 GUK1-204ENST00000366721 689 ntTSL 3 BASIC22.56■■□□□ 1.2
CHGBP05060 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.56■■□□□ 1.2
CHGBP05060 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CHGBP05060 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
CHGBP05060 KRT18P38-201ENST00000449496 1282 ntBASIC22.56■■□□□ 1.2
CHGBP05060 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.56■■□□□ 1.2
CHGBP05060 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.56■■□□□ 1.2
CHGBP05060 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.56■■□□□ 1.2
CHGBP05060 AC010331.1-201ENST00000611423 582 ntBASIC22.56■■□□□ 1.2
CHGBP05060 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHGBP05060 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.56■■□□□ 1.2
CHGBP05060 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHGBP05060 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHGBP05060 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CHGBP05060 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHGBP05060 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHGBP05060 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CHGBP05060 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHGBP05060 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHGBP05060 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHGBP05060 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHGBP05060 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHGBP05060 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHGBP05060 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CHGBP05060 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CHGBP05060 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHGBP05060 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.55■■□□□ 1.2
CHGBP05060 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC22.55■■□□□ 1.2
CHGBP05060 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHGBP05060 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.55■■□□□ 1.2
CHGBP05060 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.55■■□□□ 1.2
CHGBP05060 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHGBP05060 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.55■■□□□ 1.2
CHGBP05060 GCSHP2-201ENST00000560971 527 ntBASIC22.55■■□□□ 1.2
CHGBP05060 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHGBP05060 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.55■■□□□ 1.2
CHGBP05060 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHGBP05060 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.55■■□□□ 1.2
CHGBP05060 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CHGBP05060 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.55■■□□□ 1.2
CHGBP05060 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHGBP05060 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.54■■□□□ 1.2
CHGBP05060 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.54■■□□□ 1.2
CHGBP05060 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHGBP05060 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CHGBP05060 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHGBP05060 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.54■■□□□ 1.2
CHGBP05060 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHGBP05060 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHGBP05060 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHGBP05060 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.54■■□□□ 1.2
CHGBP05060 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHGBP05060 BX664615.1-201ENST00000443558 458 ntBASIC22.54■■□□□ 1.2
CHGBP05060 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHGBP05060 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.54■■□□□ 1.2
CHGBP05060 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHGBP05060 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC22.54■■□□□ 1.2
CHGBP05060 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHGBP05060 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHGBP05060 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHGBP05060 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.53■■□□□ 1.2
CHGBP05060 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHGBP05060 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.53■■□□□ 1.2
CHGBP05060 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CHGBP05060 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.53■■□□□ 1.2
CHGBP05060 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CHGBP05060 MIR564-202ENST00000385049 94 ntBASIC22.53■■□□□ 1.2
CHGBP05060 MIR1224-201ENST00000408193 85 ntBASIC22.53■■□□□ 1.2
CHGBP05060 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.53■■□□□ 1.2
CHGBP05060 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.53■■□□□ 1.2
CHGBP05060 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHGBP05060 AC024243.1-201ENST00000609234 778 ntBASIC22.53■■□□□ 1.2
CHGBP05060 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHGBP05060 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms